https://github.com/stjudecloud/dx-rnaseq_standard

Monolithic DNAnexus implementation of RNA-Seq V2 pipeline with miniwdl
https://github.com/stjudecloud/dx-rnaseq_standard

Last synced: 12 months ago
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Monolithic DNAnexus implementation of RNA-Seq V2 pipeline with miniwdl

• Host: GitHub
• URL: https://github.com/stjudecloud/dx-rnaseq_standard
• Owner: stjudecloud
• Created: 2020-08-11T19:05:32.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2025-03-07T15:44:45.000Z (over 1 year ago)
• Last Synced: 2025-03-15T15:31:31.348Z (over 1 year ago)
• Language: Shell
• Size: 15.6 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: Readme.developer.md

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README

          
# stjude_rnaseqv2 Developer Readme

## Running this app with additional computational resources

This app has the following entry points:

* main

When running this app, you can override the instance type to be used by

providing the ``systemRequirements`` field to ```/applet-XXXX/run``` or

```/app-XXXX/run```, as follows:

    {

      systemRequirements: {

        "main": {"instanceType": "mem2_hdd2_x2"}

      },

      [...]

    }

See Run

Specification in the API documentation for more information about the

available instance types.