https://github.com/stuartmac/speaks-bioseqs
https://github.com/stuartmac/speaks-bioseqs
Last synced: about 1 year ago
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- Host: GitHub
- URL: https://github.com/stuartmac/speaks-bioseqs
- Owner: stuartmac
- License: mit
- Created: 2024-03-12T21:20:36.000Z (over 2 years ago)
- Default Branch: main
- Last Pushed: 2024-03-21T23:59:00.000Z (over 2 years ago)
- Last Synced: 2024-03-22T11:11:35.569Z (over 2 years ago)
- Language: JavaScript
- Homepage: https://stuartmac.github.io/speaks-bioseqs/
- Size: 62.5 KB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# Speaks-Bioseqs
Speaks-Bioseqs is a singple-page web application designed to identify biological sequence formats and facillitate their conversion.
## Features
- Automatic detection of various biological sequence formats, including FASTA.
- Identification of sequence type (DNA, RNA, protein) for the given input.
- Support for single sequences.
## Planned Features
- Export functionality to download sequence data in various formats.
- Enhanced multi-sequence support, including detection of alignment.
- Extension to a Python package for integrating with BioPython for sequence format detection.
## Getting Started
### On the Web
For the web application, simply visit the [Speaks-Bioseqs website](https://stuartmac.github.io/speaks-bioseqs/).
### Local Installation
Simply clone this repository and open `index.html` in your browser.
```bash
git clone https://github.com/stuartmac/speaks-bioseqs.git
```
## Development Setup
This project uses a lite-server for local development. To set up a development server:
1. Ensure you have Node.js and npm installed.
2. Clone the repository and navigate to the project directory.
3. Install dependencies:
```bash
npm install
```
4. Start the development server:
```bash
npm start
```
## Contributing
Contributions of all kinds are welcome!
## License
Distributed under the MIT License. See `LICENSE` for more information.