https://github.com/sydney-informatics-hub/fastq-to-bam
Optimised pipeline to process whole genome sequence data from fastq to BAM on NCI Gadi
https://github.com/sydney-informatics-hub/fastq-to-bam
bioinformatics bwa-mem gatk-bestpractices mapping ngs sequencing
Last synced: 4 months ago
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Optimised pipeline to process whole genome sequence data from fastq to BAM on NCI Gadi
- Host: GitHub
- URL: https://github.com/sydney-informatics-hub/fastq-to-bam
- Owner: Sydney-Informatics-Hub
- License: gpl-3.0
- Created: 2020-07-22T03:38:01.000Z (over 5 years ago)
- Default Branch: fastq-to-bam-v2
- Last Pushed: 2022-08-12T06:24:03.000Z (over 3 years ago)
- Last Synced: 2024-04-16T03:53:29.843Z (over 1 year ago)
- Topics: bioinformatics, bwa-mem, gatk-bestpractices, mapping, ngs, sequencing
- Language: Shell
- Homepage:
- Size: 238 KB
- Stars: 17
- Watchers: 5
- Forks: 7
- Open Issues: 8