https://github.com/sydney-informatics-hub/training.alphafold
AlphaFold predictions of protein structure on Sydney Research Compute Infrastructure
https://github.com/sydney-informatics-hub/training.alphafold
alphafold hpc python training
Last synced: about 2 months ago
JSON representation
AlphaFold predictions of protein structure on Sydney Research Compute Infrastructure
- Host: GitHub
- URL: https://github.com/sydney-informatics-hub/training.alphafold
- Owner: Sydney-Informatics-Hub
- License: mit
- Created: 2023-04-21T03:55:08.000Z (about 2 years ago)
- Default Branch: main
- Last Pushed: 2024-01-11T09:45:49.000Z (over 1 year ago)
- Last Synced: 2025-01-22T11:13:06.713Z (3 months ago)
- Topics: alphafold, hpc, python, training
- Language: CSS
- Homepage: https://sydney-informatics-hub.github.io/training.alphafold/
- Size: 14.9 MB
- Stars: 0
- Watchers: 7
- Forks: 1
- Open Issues: 2
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# SIH AlphaFold2 Training
## File location
- Store `index.qmd`, `setup.qmd` files in the root directory
- Store notebooks (.ipynb), R files (as .qmd or .rmd), and markdown lessons (.qmd or .md) in the `notebooks` folder
- Store figures in a `figs` folder
## How to use this repo
1. Edit `index.qmd` to change the main landing page. This is basically a markdown file.
2. Edit or create `setup.qmd` to change the Setup instruction pages. Same - basically a md file.
3. Edit `_quarto.yml` to change the dropdown menu options.
4. Add additional `*.md` files to the root dir to have them converted to html files (and add them to `_quarto.yml` to make them navigable), if you'd like.
5. Edit this Readme in your fork to reflect the content of your workshop.
The project will be built and rendered automatically (via github actions) at a URL with this format:
```html
https://pages.github.sydney.edu.au/informatics/training.alphafold/
```