https://github.com/synbiodex/pysbol3

Native python implementation of SBOL 3.0 specification
https://github.com/synbiodex/pysbol3

Last synced: 4 days ago
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Native python implementation of SBOL 3.0 specification

• Host: GitHub
• URL: https://github.com/synbiodex/pysbol3
• Owner: SynBioDex
• License: mit
• Created: 2020-05-13T13:23:52.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2024-04-08T10:42:43.000Z (9 months ago)
• Last Synced: 2024-04-14T07:09:58.562Z (9 months ago)
• Language: Python
• Homepage:
• Size: 1.87 MB
• Stars: 33
• Watchers: 15
• Forks: 15
• Open Issues: 47
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

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README

        
![pySBOL3 logo](logos/pySBOL3-logo-small.jpeg)

# pySBOL3

![gh-action badge](https://github.com/SynBioDex/pySBOL3/workflows/Python%20package/badge.svg)

![readthedocs badge](https://readthedocs.org/projects/pysbol3/badge/)

pySBOL3 is a

[Python](https://www.python.org/) implementation of the [SBOL 3

specification](https://sbolstandard.org/datamodel-specification/).

pySBOL3 implements [SBOL

3.0.1](https://sbolstandard.org/docs/SBOL3.0.1.pdf).

## Installation

pySBOL3 requires [Python 3.7](https://www.python.org) or newer.

Use `pip` (or `pip3`) to install the library:

```

pip install sbol3

```

## Documentation

[Documentation for pySBOL3 is available at read-the-docs](https://pysbol3.readthedocs.io).

## Development

Please

[fork the GitHub repository](https://guides.github.com/activities/forking/),

and follow

[GitHub flow](https://guides.github.com/introduction/flow/)

for development.

## Acknowledgements

If you use pySBOL3 please cite:

> Tom Mitchell, Jacob Beal, and Bryan Bartley.

> [pySBOL3: SBOL3 for Python Programmers](https://doi.org/10.1021/acssynbio.2c00249).

> ACS Synthetic Biology, available online June 29, 2022. PMID: 35767721.

Development of this library has been supported by the 

[DARPA Synergistic Discovery and Design (SD2)](https://www.darpa.mil/program/synergistic-discovery-and-design)

program and [Raytheon BBN Technologies](http://bbn.com/).