https://github.com/synbiodex/pysbol3
Native python implementation of SBOL 3.0 specification
https://github.com/synbiodex/pysbol3
Last synced: 9 months ago
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Native python implementation of SBOL 3.0 specification
- Host: GitHub
- URL: https://github.com/synbiodex/pysbol3
- Owner: SynBioDex
- License: mit
- Created: 2020-05-13T13:23:52.000Z (about 6 years ago)
- Default Branch: main
- Last Pushed: 2024-04-08T10:42:43.000Z (about 2 years ago)
- Last Synced: 2024-04-14T07:09:58.562Z (about 2 years ago)
- Language: Python
- Homepage:
- Size: 1.87 MB
- Stars: 33
- Watchers: 15
- Forks: 15
- Open Issues: 47
-
Metadata Files:
- Readme: README.md
- License: LICENSE.txt
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README
# pySBOL3
pySBOL3 is a
[Python](https://www.python.org/) implementation of the [SBOL 3
specification](https://sbolstandard.org/datamodel-specification/).
pySBOL3 implements [SBOL
3.0.1](https://sbolstandard.org/docs/SBOL3.0.1.pdf).
## Installation
pySBOL3 requires [Python 3.7](https://www.python.org) or newer.
Use `pip` (or `pip3`) to install the library:
```
pip install sbol3
```
## Documentation
[Documentation for pySBOL3 is available at read-the-docs](https://pysbol3.readthedocs.io).
## Development
Please
[fork the GitHub repository](https://guides.github.com/activities/forking/),
and follow
[GitHub flow](https://guides.github.com/introduction/flow/)
for development.
## Acknowledgements
If you use pySBOL3 please cite:
> Tom Mitchell, Jacob Beal, and Bryan Bartley.
> [pySBOL3: SBOL3 for Python Programmers](https://doi.org/10.1021/acssynbio.2c00249).
> ACS Synthetic Biology, available online June 29, 2022. PMID: 35767721.
Development of this library has been supported by the
[DARPA Synergistic Discovery and Design (SD2)](https://www.darpa.mil/program/synergistic-discovery-and-design)
program and [Raytheon BBN Technologies](http://bbn.com/).