https://github.com/szcf-weiya/splitclustertest.jl

Julia package for "FDR Control via Data Splitting for Testing-after-Clustering (arXiv: 2410.06451)"
https://github.com/szcf-weiya/splitclustertest.jl

data-splitting fdr post-selection

Last synced: about 1 month ago
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Julia package for "FDR Control via Data Splitting for Testing-after-Clustering (arXiv: 2410.06451)"

• Host: GitHub
• URL: https://github.com/szcf-weiya/splitclustertest.jl
• Owner: szcf-weiya
• License: mit
• Created: 2024-10-16T21:03:48.000Z (2 months ago)
• Default Branch: master
• Last Pushed: 2024-11-06T21:33:14.000Z (about 2 months ago)
• Last Synced: 2024-11-06T22:22:40.764Z (about 2 months ago)
• Topics: data-splitting, fdr, post-selection
• Language: Julia
• Homepage: https://hohoweiya.xyz/SplitClusterTest.jl/
• Size: 1.02 MB
• Stars: 1
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# SplitClusterTest.jl 

[![](https://img.shields.io/badge/docs-latest-blue.svg)](https://szcf-weiya.github.io/SplitClusterTest.jl/dev) [![codecov](https://codecov.io/gh/szcf-weiya/SplitClusterTest.jl/graph/badge.svg?token=dsRMZFM1q5)](https://codecov.io/gh/szcf-weiya/SplitClusterTest.jl) [![CI](https://github.com/szcf-weiya/SplitClusterTest.jl/actions/workflows/ci.yml/badge.svg)](https://github.com/szcf-weiya/SplitClusterTest.jl/actions/workflows/ci.yml)

Julia package for

> Wang, L., Lin, Y., & Zhao, H. (2024). False Discovery Rate Control via Data Splitting for Testing-after-Clustering (arXiv:2410.06451). arXiv. 

>

The proposed approach addresses the double-dipping issue in testing-after-clustering tasks, particularly in single-cell data analysis, where the same data is used both for clustering (to identify cell types) and for testing (to select differentially expressed genes), which can inflate false positives.

![dd](https://github.com/user-attachments/assets/e5383503-2e4d-45d0-adff-77f3a0f82899)

![xkcd](https://github.com/user-attachments/assets/8de07b78-8346-4316-ae8c-855c305d625f)

> The xkcd-style cartoon is drawn with the help of R package [xkcd](https://xkcd.r-forge.r-project.org/)

## :arrow_right: See also

- R package: 

- For the comparison between data splitting and data fission, check .