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https://github.com/talegari/ggisotonic

Add isotonic or monotonic regression curves to ggplots
https://github.com/talegari/ggisotonic

Last synced: 4 months ago
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Add isotonic or monotonic regression curves to ggplots

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README

          

---
output: github_document
---

```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
library("ggisotonic")
```

# ggisotonic

`ggisotonic` introduces a ggplot layer `stat_isotonic` to add isotonic or monotonic regression curves similar to `ggplot2::geom_smooth`.

## Installation

```{r, eval = FALSE}
install.packages("ggisotonic")
library("ggisotonic")
```

You can install the released version of ggisotonic from github with:

```{r, eval = FALSE}
remotes::install_github("talegari/ggisotonic")
```

## Example

```{r example}
library("ggplot2")
set.seed(100)
dataset = data.frame(x = sort(runif(1e2)),
y = c(rnorm(1e2/2), rnorm(1e2/2, mean = 4)),
w = sample(1:3, 1e2, replace = TRUE)
)
print(head(dataset))

```

```{r}
# plot isotonic regression line
ggplot(dataset, aes(x = x, y = y)) +
geom_point() +
stat_isotonic()

# plot weighted isotonic regression line along with facets
ggplot(dataset, aes(x = x, y = y)) +
geom_point() +
stat_isotonic(aes(w = w), color = 'red', size = 1.5, show.legend = FALSE) +
facet_wrap(w ~ .)
```