https://github.com/tdewolff/lung_fitting

https://github.com/tdewolff/lung_fitting

Last synced: 3 months ago
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• Host: GitHub
• URL: https://github.com/tdewolff/lung_fitting
• Owner: tdewolff
• Created: 2019-01-11T01:01:54.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2019-01-11T03:44:25.000Z (over 6 years ago)
• Last Synced: 2025-01-29T06:51:39.828Z (5 months ago)
• Language: Python
• Size: 1.51 MB
• Stars: 0
• Watchers: 3
• Forks: 3
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Install

    sudo apt-get install qtcreator python-pyqt5 pyqt5-dev-tools

    pip install PySide

Install [ZincPythonTools](https://github.com/OpenCMISS-Bindings/ZincPythonTools):

    git clone https://github.com/OpenCMISS-Bindings/ZincPythonTools

    pip install ZincPythonTools

Install [joycemol31/lungsim](https://github.com/joycemol31/lungsim):

    git clone https://github.com/joycemol31/lungsim

    mkdir lungsim-build

    cd lungsim-build

    cmake ../lungsim

    make

    pip install -e src/bindings/python

If you have previously install `lungsim` from LungNoodle, please edit `site-packages/easy-install.pth` in your virtualenv folder to contain only the desired version of `lungsim` to prevent confusing Python.

# Run

    python run.py

![Preview](https://raw.githubusercontent.com/tdewolff/lung_fitting/master/preview.jpg)

# Example

You can load the example files from `example/`, but be aware that due to bugs in the Fortran code the resulting mesh is invalid.

# Guide

Start QtCreator and open `src/qt/view.ui`. This is the file that defines the GUI and can be edited through QtCreator. You can add and move around widgets, but remember the `objectName` (right-click on widget -> Change objectName) as that is how the widget is referenced in the code. When done, save and run the following command to generate the Python files in `src/ui_*.py`.

    src/build.sh

In `src/view.py` you can edit the code that handles any interaction with the GUI. It performs actions when buttons are pressed for example.

In `src/scene.py` we handle interactions with the Zinc scene to which we can add new models from `src/model.py`.