https://github.com/tfkillian/shiny

Shiny app templates for visualizaling bioinformatic data analysis results
https://github.com/tfkillian/shiny

Last synced: 2 months ago
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Shiny app templates for visualizaling bioinformatic data analysis results

• Host: GitHub
• URL: https://github.com/tfkillian/shiny
• Owner: tfkillian
• Created: 2019-11-30T09:50:06.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2020-05-13T17:58:13.000Z (over 5 years ago)
• Last Synced: 2024-12-04T09:40:04.732Z (10 months ago)
• Language: R
• Size: 168 MB
• Stars: 1
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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• jimsghstars - tfkillian/shiny - Shiny app templates for visualizaling bioinformatic data analysis results (R)

README

          
# shiny

This repository contains Shiny web app templates for visualizaling bioinformatic

data analysis results. So far, there are two types of Shiny apps, which

are described below:

-   RNAseq viewer

    This type of app displays 3 interactive plots from an RNAseq analysis. These

    plots are, MA plot, Volcano plot and a count plot, which is dynamically

    plotted by user click input. There is also an html table displaying the

    results of the analysis which can be queried, and interacts with the display

    plots above. An advanced version of this app displays additional tabs of 

    GO terms and KEGG pathways to be selected, and which genes relating to those

    GO terms and KEGG pathways appears in corresponding volcano plots.

-   Proteomic viewer

    This type of app displays 2 interactive plots from a proteomic mass spectrometry analysis. These

    plots are, Volcano plot and an expression plot, which is dynamically

    plotted by user click input. There is also an html table displaying the

    results of the analysis which can be queried, and interacts with the display

    plots above.