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https://github.com/thecoderpinar/hms-brainactivity-analysiss
Welcome to the GitHub repo for "HMS - EEG Exploration & Neurocritical Care Journey"! Explore EEG data, understand wave patterns, and delve into conditions like LPDs, GPDs, LRDA, and GRDA.
https://github.com/thecoderpinar/hms-brainactivity-analysiss
critical-care data-analysis data-science data-visualization deep-neural-networks eeg eeg-signals exploratory-data-analysis healthcare medical-research neuroscience signal-processing
Last synced: about 1 month ago
JSON representation
Welcome to the GitHub repo for "HMS - EEG Exploration & Neurocritical Care Journey"! Explore EEG data, understand wave patterns, and delve into conditions like LPDs, GPDs, LRDA, and GRDA.
- Host: GitHub
- URL: https://github.com/thecoderpinar/hms-brainactivity-analysiss
- Owner: ThecoderPinar
- License: apache-2.0
- Created: 2024-01-10T12:54:09.000Z (about 1 year ago)
- Default Branch: main
- Last Pushed: 2024-01-10T13:47:52.000Z (about 1 year ago)
- Last Synced: 2024-01-10T14:57:36.404Z (about 1 year ago)
- Topics: critical-care, data-analysis, data-science, data-visualization, deep-neural-networks, eeg, eeg-signals, exploratory-data-analysis, healthcare, medical-research, neuroscience, signal-processing
- Language: Jupyter Notebook
- Homepage: https://www.kaggle.com/competitions/hms-harmful-brain-activity-classification/overview
- Size: 5.66 MB
- Stars: 2
- Watchers: 1
- Forks: 1
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
๐ฉ๏ธ HMS - Exploratory Data Analysis and Journey in Neurocritical Care ๐
A comprehensive exploration into neurocritical care using EEG data analysis.
Explore the docs ยป
View Demo
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Table of Contents
## About The Project
Exploratory Data Analysis and Journey in Neurocritical Care is a project that delves deep into the analysis of EEG data to understand brain activity in critical care scenarios.
### What is EEG?
Electroencephalography (EEG) is a non-invasive method used to record electrical activity in the brain. Learn more about EEG [here](#what-is-eeg).
### How Spectrograms are Related to EEG?
Spectrograms play a crucial role in analyzing EEG data. Find out more about their relationship [here](#how-spectrograms-are-related-to-eeg).
### LPD/GPD/LRDA/GRDA Conditions
Explore various brain conditions such as Lateralized Periodic Discharges (LPDs), Generalized Periodic Discharges (GPDs), Lateralized Rhythmic Delta Activity (LRDA), and Generalized Rhythmic Delta Activity (GRDA) [here](#lpd-gpd-lrda-grda-conditions).
## Getting Started
To get a local copy up and running follow these simple steps.
### Prerequisites
This is an example of how to list things you need to use the software and how to install them.
## Installation
Clone the repository ๐
```bash
git clone https://github.com/ThecoderPinar/HMS-BrainActivity-Analysiss.git
```
## ๐ Usage
Welcome to the usage section! Here, you'll find examples and code snippets to help you make the most of this project.
### 1. Data Analysis with Jupyter Notebooks
Navigate to the `๐ notebooks` directory to find Jupyter notebooks for in-depth data analysis and visualization.
```bash
cd notebook/
jupyter notebook
```
### 2. Exploring EEG Data
Check out the ๐ data directory (please note, actual EEG data is not provided for privacy and ethical reasons). You can replace the placeholder with your own data.
๐ data
- [ ] โโโ train_eegs\1000913311.parquet
- [ ] โโโ train_spectrograms\1000189855.parquet
- [ ] โโโ sample_submission.csv
- [ ] โโโ test.csv
- [ ] โโโ train.csv
### 3. Project Documentation
Explore the ๐ docs directory for comprehensive project documentation, including this README.
```bash
cd docs/
```
### 4. Viewing Outputs
Navigate to the output directories:
๐ out
- [ ] โโโ submission.csv
- [ ] โโโ out_image/
- [ ] โโโ out_audio/
## ๐ Notebook
Explore the analysis and visualization of harmful brain activity in the following Jupyter Notebook:
- [`https://github.com/ThecoderPinar/HMS-BrainActivity-Analysiss/blob/main/notebook/hms-eda-harmful-brain-activity.ipynb`](https://github.com/ThecoderPinar/HMS-BrainActivity-Analysiss/blob/main/notebook/hms-eda-harmful-brain-activity.ipynb)
Feel free to open the notebook to dive into the details of our exploratory data analysis journey! ๐ง ๐
## ๐ Roadmap
Here's what's coming up for this project:
### ๐ Version 1.0.0 (Current Release)
- [x] ๐ Initial release with basic functionalities.
- [x] ๐ Exploratory Data Analysis (EDA) on EEG data.
- [x] ๐ Implement basic data visualization techniques.
### ๐ Version 1.1.0
- [ ] ๐จ Add advanced visualization features.
- [ ] ๐ Include statistical analysis of EEG patterns.
- [ ] ๐ Improve documentation for better understanding.
### โจ Version 1.2.0
- [ ] ๐ค Integrate machine learning models for EEG pattern recognition.
- [ ] ๐ Enhance user interface for better user experience.
- [ ] ๐ Support for additional EEG datasets.
### ๐ง Version 1.3.0
- [ ] โฉ Implement real-time EEG data processing.
- [ ] ๐ Provide interactive dashboards for data exploration.
- [ ] ๐ค Collaborate with the community to address user feedback.
### ๐ฎ Future Releases
- [ ] โ๏ธ Explore cloud-based EEG data analysis.
- [ ] ๐ฑ Develop mobile applications for on-the-go EEG analysis.
- [ ] ๐ Continuous improvement based on user feedback and technological advancements.
Feel free to suggest additional features or improvements by opening an issue or reaching out! ๐
## Contributing
Contributions make the open source community thrive. If you'd like to contribute to this project, follow these steps:
1. Fork the Project
2. Create your Feature Branch (`git checkout -b feature/AmazingFeature`)
3. Commit your Changes (`git commit -m 'Add some AmazingFeature'`)
4. Push to the Branch (`git push origin feature/AmazingFeature`)
5. Open a Pull Request
## License
Distributed under the [Apache License 2.0](LICENSE). See `LICENSE` for more information.
## Contact
If you want to reach out, feel free to contact me:
Pฤฑnar Topuz - [[email protected]](mailto:[email protected])
Project Link: [https://github.com/QMindSolutions/HMS-BrainActivity-Analysis](https://github.com/QMindSolutions/HMS-BrainActivity-Analysis)
## Acknowledgements
Give credit to the tools, libraries, or resources you used or were inspired by in this project. It's a great way to show appreciation.
* [Tool or Library Name](https://example.com/tool)
* [Another Tool](https://example.com/another-tool)
* [Inspiration Source](https://example.com/inspiration)