https://github.com/truemagic-coder/fasta-upload-search
https://github.com/truemagic-coder/fasta-upload-search
Last synced: 3 months ago
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- Host: GitHub
- URL: https://github.com/truemagic-coder/fasta-upload-search
- Owner: truemagic-coder
- License: mit
- Created: 2019-12-05T03:10:31.000Z (over 5 years ago)
- Default Branch: master
- Last Pushed: 2019-12-09T15:41:16.000Z (over 5 years ago)
- Last Synced: 2025-03-20T05:13:38.476Z (3 months ago)
- Language: Rust
- Size: 40 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# Fasta file upload and sequence search
### Run
``` open web browser to localhost:3000 and upload file(s) then ```
``` open web browser to localhost:3000/search and input search sequence ```
### Result
``` file(s) will show up in ./tmp in the same directory as the running process ```
``` search will search all fasta files in ./tmp for the sequence and print out the number of occurrences in each chromosome in the console ```
Note: this is a naive implementation and will panic on any error