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https://github.com/veit/jupyter-tutorial

Training materials for setting up and using a research infrastructure based on Jupyter notebooks: https://cusy.io/en/seminars
https://github.com/veit/jupyter-tutorial

ipython ipython-widget ipywidget jupyter jupyter-notebook jupyterhub notebook

Last synced: 1 day ago
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Training materials for setting up and using a research infrastructure based on Jupyter notebooks: https://cusy.io/en/seminars

Awesome Lists containing this project

README

        

Quick start
===========

.. _badges:

Status
------

.. image:: https://img.shields.io/github/contributors/veit/jupyter-tutorial.svg
:alt: Contributors
:target: https://github.com/veit/jupyter-tutorial/graphs/contributors
.. image:: https://img.shields.io/github/license/veit/jupyter-tutorial.svg
:alt: License
:target: https://github.com/veit/jupyter-tutorial/blob/master/LICENSE
.. image:: https://results.pre-commit.ci/badge/github/veit/jupyter-tutorial/main.svg
:alt: pre-commit.ci status
:target: https://results.pre-commit.ci/latest/github/veit/jupyter-tutorial/main
.. image:: https://readthedocs.org/projects/jupyter-tutorial/badge/?version=latest
:alt: Docs
:target: https://jupyter-tutorial.readthedocs.io/en/latest/
.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.10961038.svg
:alt: DOI
:target: https://doi.org/10.5281/zenodo.10961038
.. image:: https://img.shields.io/badge/dynamic/json?label=Mastodon&query=totalItems&url=https%3A%2F%2Fmastodon.social%2F@JupyterTutorial%2Ffollowers.json&logo=mastodon
:alt: Mastodon
:target: https://mastodon.social/@JupyterTutorial

.. _first-steps:

Installation
------------

#. Download and unpack:

.. code-block:: console

$ curl -O https://codeload.github.com/veit/jupyter-tutorial/zip/main
$ unzip main
Archive: main

creating: jupyter-tutorial-main/

#. Install Python packages:

.. code-block:: console

$ cd jupyter-tutorial-main
$ python3 -m venv .venv
$ . .venv/bin/activate
$ python -m pip install --upgrade pip
$ python -m pip install -e ".[dev]"

#. Install the `Jupyter Notebook Extensions
`_ Javascript and CSS
files:

.. code-block:: console

$ jupyter contrib nbextension install --user
jupyter contrib nbextension install --user
Installing jupyter_contrib_nbextensions nbextension files to jupyter data directory

Successfully installed jupyter-contrib-core-0.3.3 jupyter-contrib-nbextensions-0.5.1
jupyter-highlight-selected-word-0.2.0 jupyter-latex-envs-1.4.6
jupyter-nbextensions-configurator-0.4.1

$ jupyter nbextension enable latex_envs --user --py
Enabling notebook extension latex_envs/latex_envs...
- Validating: OK

#. Create HTML documentation:

Note that pandoc has to be installed. On Debian/Ubuntu you can just run

.. code-block:: console

$ sudo apt install pandoc

To create the HTML documentation run these commands:

.. code-block:: console

$ cd docs/
$ make html

#. Create a PDF:

For the creation of a PDF file you need additional packages.

For Debian/Ubuntu you get them with the following command:

.. code-block:: console

$ sudo apt install texlive-latex-recommended texlive-latex-extra texlive-fonts-recommended latexmk

or for macOS with:

.. code-block:: console

$ brew cask install mactex

🍺 mactex was successfully installed!
$ curl --remote-name https://www.tug.org/fonts/getnonfreefonts/install-getnonfreefonts
$ sudo texlua install-getnonfreefonts

mktexlsr: Updating /usr/local/texlive/2020/texmf-dist/ls-R...
mktexlsr: Done.

Then you can generate a PDF with:

.. code-block:: console

$ make latexpdf

The LaTeX files are in _build/latex.
Run 'make' in that directory to run these through (pdf)latex

You can find the PDF at ``docs/_build/latex/jupytertutorial.pdf``.

#. Run Vale to check spelling

You can install download cusy-vale with:

.. code-block:: console

$ vale sync
Syncing cusy-vale [1/1] ██████████████████████████████████████████████ 100% | 0s
SUCCESS Synced 1 package(s) to '/Users/veit/cusy/trn/jupyter-tutorial/styles'.

.. seealso::
* `Vale installation `_
* `Vale formats `_

Now you can check the RestructuredText files with:

.. code-block:: console

$ vale .
✔ 0 errors, 0 warnings and 0 suggestions in 201 files.

.. _follow-us:

Follow us
---------

* `GitHub `_
* `Twitter `_
* `Mastodon `_

Pull-Requests
-------------

If you have suggestions for improvements and additions, I recommend that you
create a `Fork `_ of my `GitHub
Repository `_ and make your changes
there. . You are also welcome to make a *pull request*. If the changes
contained therein are small and atomic, I’ll be happy to look at your
suggestions.