https://github.com/veupathdb/apicommonworkflow

https://github.com/veupathdb/apicommonworkflow

Last synced: 11 months ago
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• Host: GitHub
• URL: https://github.com/veupathdb/apicommonworkflow
• Owner: VEuPathDB
• License: apache-2.0
• Created: 2019-07-19T14:52:35.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2025-08-01T13:25:41.000Z (11 months ago)
• Last Synced: 2025-08-01T15:35:16.446Z (11 months ago)
• Language: Perl
• Homepage:
• Size: 13.1 MB
• Stars: 0
• Watchers: 22
• Forks: 1
• Open Issues: 2
• Metadata Files:
  • Readme: README.org
  • License: LICENSE

Awesome Lists containing this project

README

          
* ApiCommonWorkflow

workflow step classes and workflow graphs in XML for the genomic sites

** Dependencies

   + yarn / npm / ant

   + environment variables for GUS_HOME and PROJECT_HOME

   + Internal Dependencies

     + ApiCommonData, ReFlow, GGTools, EbrcModelCommon

** Installation instructions.

   + bld ApiCommonWorkflow

** Operating instructions.

   + changes to workflow template files requires generateFromDatasets ExampleDatasets   

** Manifest

   + Main/bin :: scripts to generate workflow files from dataset files for a provided component project.

   + Main/lib/perl :: workflow step classes in Perl. These are reusable modules for any type of task.  

   + Main/lib/xml :: workflow graphs in XML. These graphs have steps that depend on each other and can also call subgraphs. Each step is a parameterized call to a step class.