https://github.com/vitroid/genice-voronoi
A GenIce plubin for Voronoi analysis.
https://github.com/vitroid/genice-voronoi
Last synced: over 1 year ago
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A GenIce plubin for Voronoi analysis.
- Host: GitHub
- URL: https://github.com/vitroid/genice-voronoi
- Owner: vitroid
- Created: 2018-04-04T14:05:36.000Z (about 8 years ago)
- Default Branch: master
- Last Pushed: 2018-04-09T10:25:04.000Z (about 8 years ago)
- Last Synced: 2025-01-21T08:44:58.967Z (over 1 year ago)
- Language: Python
- Size: 11.7 KB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# genice-voronoi
A [GenIce](https://github.com/vitroid/GenIce) plugin for Voronoi analysis.
## Requirements
% make prepare
will install required packages via pip.
* [GenIce](https://github.com/vitroid/GenIce) >=0.16.
* [graphstat](https://github.com/vitroid/graphstat) >=0.1. (Not PIP-ready.)
* [yaplotlib](https://github.com/vitroid/yaplotlib) >=0.1.
* mysqlclient
You have to setup MySQL database if you want to give a unique ID for graphs.
## Installation
### System-wide installation
Not supported.
### Private installation
% make install
or copy the files in formats/ into your local formats folder of GenIce.
## Usage
% genice 1c -r 3 3 3 -f voronoi_analysis > 1c.voro
uses the temporary DB.
% genice 1c -r 3 3 3 -f voronoi_analysis[voronoi.db] > 1c.voro
uses the local voronoi.db file via sqlite3.
% genice 1c -r 3 3 3 -f voronoi_analysis[http://...] > 1c.voro
uses the global MySQL DB.
## Test in place
% make test