https://github.com/vjcitn/biocfhir

Illustration of FHIR V4 Processing with synthea data
https://github.com/vjcitn/biocfhir

fhir

Last synced: about 1 month ago
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Illustration of FHIR V4 Processing with synthea data

• Host: GitHub
• URL: https://github.com/vjcitn/biocfhir
• Owner: vjcitn
• Created: 2022-10-01T11:23:24.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2024-01-10T18:10:42.000Z (over 1 year ago)
• Last Synced: 2024-10-26T14:53:44.228Z (7 months ago)
• Topics: fhir
• Language: R
• Homepage: https://vjcitn.github.io/BiocFHIR
• Size: 9.83 MB
• Stars: 4
• Watchers: 3
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
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# BiocFHIR

Illustration of FHIR V4 Processing with synthea data

This R package addresses very basic tasks of parsing FHIR R4 documents in JSON format.

We will work through elements of the following concept map:

![coggle](https://github.com/vjcitn/BiocFHIR/raw/main/conceptmap.jpg)

# Use in AnVIL

In a terra workspace 

- use an Rstudio cloud environment

- start a git project

- use https://github.com/vjcitn/BiocFHIR as the repository

- in the Rstudio console 

    - use `BiocManager::install("vjcitn/BiocFHIR")` to get the software

    - navigate to the vignettes folder and knit the Rmd file to HTML