https://github.com/vsoch/freegenes

FreeGenes BioNode with Django
https://github.com/vsoch/freegenes

biobricks django docker freegenes

Last synced: over 1 year ago
JSON representation

FreeGenes BioNode with Django

• Host: GitHub
• URL: https://github.com/vsoch/freegenes
• Owner: vsoch
• License: mpl-2.0
• Created: 2019-07-30T18:10:10.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2022-04-22T22:04:25.000Z (over 4 years ago)
• Last Synced: 2025-04-12T12:12:12.433Z (over 1 year ago)
• Topics: biobricks, django, docker, freegenes
• Language: JavaScript
• Homepage: https://vsoch.github.io/freegenes/
• Size: 11.2 MB
• Stars: 2
• Watchers: 3
• Forks: 4
• Open Issues: 24
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • Contributing: .github/CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: .github/CODE_OF_CONDUCT.md

Awesome Lists containing this project

README

          
# FreeGenes Django

[![DOI](https://zenodo.org/badge/199703713.svg)](https://zenodo.org/badge/latestdoi/199703713)

[![Docker Repository on Quay](https://quay.io/repository/vsoch/freegenes/status "Docker Repository on Quay")](https://quay.io/repository/vsoch/freegenes)

 - [Documentation](https://vsoch.github.io/freegenes/)

![docs/assets/img/freegenes.png](docs/assets/img/freegenes.png)

## What is FreeGenes?

FreeGenes is an intiative by the BioBricks Foundation to create

an open technology commons. You can read more about it [here](https://biobricks.org/freegenes/).

## Images Included

FreeGenes Django consists of several Docker images, and they are integrated 

to work together using [docker-compose.yml](docker-compose.yml). 

The images are the following:

 - **quay.io/vsoch/freegenes**: is the main uwsgi application, which serves a Django (python-based) application.

 - **nginx**: pronounced (engine-X) is the webserver. The starter application is configured for http, however you should follow the instructions to set up https properly. Note that we build a custom nginx image that takes advantage of the [nginx upload module](https://www.nginx.com/resources/wiki/modules/upload/).

 - **worker**: is the same uwsgi image, but with a running command that is specialized to perform tasks. The tasks are run via [django-rq](https://github.com/rq/django-rq) that uses a

 - **redis**: database to organize the jobs themselves.

 - **scheduler** jobs can be scheduled using the scheduler.

If you have any issues, please [open on the issue board](https://github.com/singularityhub/sregistry/issues).

## License

This code is licensed under the MPL 2.0 [LICENSE](LICENSE).