https://github.com/warelab/gramene-solr

https://github.com/warelab/gramene-solr

database gramene gramene-search javascript nodejs solr

Last synced: 20 days ago
JSON representation

• Host: GitHub
• URL: https://github.com/warelab/gramene-solr
• Owner: warelab
• License: apache-2.0
• Created: 2014-11-25T14:38:10.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2024-07-24T19:17:56.000Z (6 months ago)
• Last Synced: 2024-07-24T22:15:38.255Z (6 months ago)
• Topics: database, gramene, gramene-search, javascript, nodejs, solr
• Language: JavaScript
• Size: 260 KB
• Stars: 0
• Watchers: 4
• Forks: 0
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
convert mongo genes to solr genes

```

cd genes

node --max-old-space-size=8192 ./mongo2solr.js > solr_genes.json

```

load into solr genes core

```

curl 'http://brie:8984/solr/genes55/update?commit=true' --data-binary @solr_genes.json -H 'Content-type:application/json'

```

create suggestions

```

cd ../suggestions

node aux.js http://brie:8984/solr/genes55

node --max-old-space-size=8192 ./genes.js http://brie:8984/solr/genes55 > genes.json

```

load into solr suggestions core

```

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @GO.json -H 'Content-type:application/json'

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @PO.json -H 'Content-type:application/json'

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @taxonomy.json -H 'Content-type:application/json'

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @domains.json -H 'Content-type:application/json'

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @pathways.json -H 'Content-type:application/json'

curl 'http://brie:8984/solr/suggestions55/update?commit=true' --data-binary @genes.json -H 'Content-type:application/json'

```