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https://github.com/waveform-computing/ctutils

A set of simple tools for analyzing data in CT scans
https://github.com/waveform-computing/ctutils

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A set of simple tools for analyzing data in CT scans

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README

          

.. -*- rst -*-

========
CT Utils
========

This project provides a set of small utilities for processing data from CT
scanners in a variety of formats. Currently, the supported formats are:

* Xradia's TXM format
* Volume Graphics VGI+VOL format
* Grayscale TIFF stacks (8-bit, 16-bit)

At the moment, the project's goal is to produce a set of simple command line
tools for batch processing of CT scans, and an API to permit easy access to
scan data from Python.

.. note::

Please note that our understanding of several of the formats above is
limited (in particular TXM and VGI+VOL), specifically in terms of the data
types supported within these files.

If you encounter a file which does not work with CT Utils, please file a
`bug report `_ so that we can enhance the suite. Obviously
example files make debugging easier, but we understand there may be
confidentiality issues with certain scans (publication embargoes, medical
privacy, etc.). If this applies to your scans, please do not attach them to
the bug report!

Links
=====

* The project is licensed under the `GPL v3`_ or above
* Project `source code`_ is hosted by GitHub which also hosts the `bug tracker`_
* The `documentation`_ is hosted by ReadTheDocs

.. _documentation: http://ctutils.readthedocs.org/
.. _source code: https://github.com/waveform-computing/ctutils
.. _bug tracker: https://github.com/waveform-computing/ctutils/issues
.. _GPL v3: https://www.gnu.org/licenses/gpl-3.0.html