https://github.com/welch-lab/liger

R package for integrating and analyzing multiple single-cell datasets
https://github.com/welch-lab/liger

nonnegative-matrix-factorization r single-cell

Last synced: 2 months ago
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R package for integrating and analyzing multiple single-cell datasets

• Host: GitHub
• URL: https://github.com/welch-lab/liger
• Owner: welch-lab
• License: gpl-3.0
• Created: 2018-04-10T12:20:56.000Z (about 8 years ago)
• Default Branch: master
• Last Pushed: 2025-12-16T16:27:14.000Z (6 months ago)
• Last Synced: 2025-12-18T03:00:49.222Z (6 months ago)
• Topics: nonnegative-matrix-factorization, r, single-cell
• Language: R
• Homepage:
• Size: 209 MB
• Stars: 420
• Watchers: 21
• Forks: 81
• Open Issues: 45
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS.md
  • License: LICENSE

Awesome Lists containing this project

• awesome-single-cell - LIGER - [R] - LIGER (Linked Inference of Genomic Experimental Relationships) is a package for integrating and analyzing multiple single-cell datasets. [Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity](https://www.cell.com/cell/fulltext/S0092-8674%2819%2930504-5) (Software packages / Multi-assay data integration)