https://github.com/wuweiweiwu/computational-genomics

computation genomics homeworks. CSCI5481 at University of Minnesota
https://github.com/wuweiweiwu/computational-genomics

burst computational-biology python

Last synced: 6 months ago
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computation genomics homeworks. CSCI5481 at University of Minnesota

• Host: GitHub
• URL: https://github.com/wuweiweiwu/computational-genomics
• Owner: wuweiweiwu
• Created: 2018-01-12T23:14:22.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2022-12-08T00:41:26.000Z (almost 3 years ago)
• Last Synced: 2025-03-25T04:52:26.618Z (7 months ago)
• Topics: burst, computational-biology, python
• Language: Python
• Homepage:
• Size: 4.18 MB
• Stars: 4
• Watchers: 0
• Forks: 2
• Open Issues: 19
• Metadata Files:
  • Readme: README.md

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README

          
# Computational Genomics CSCI 5481

## hw1 

implementation of python wrapper for BURST

## hw2 sequence alignment

implementations of Needleman-Wunsch and also the anchored version

## hw3 phylogeny inference

implementation of Nei-Saitou neighbor joining algorithm