https://github.com/xiangruili/dicm2nii

DICOM to NIfTI conversion, NIfTI tools
https://github.com/xiangruili/dicm2nii

Last synced: about 1 month ago
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DICOM to NIfTI conversion, NIfTI tools

• Host: GitHub
• URL: https://github.com/xiangruili/dicm2nii
• Owner: xiangruili
• License: bsd-2-clause
• Created: 2016-06-12T21:16:36.000Z (over 8 years ago)
• Default Branch: master
• Last Pushed: 2024-08-21T15:58:32.000Z (4 months ago)
• Last Synced: 2024-08-22T18:28:03.196Z (4 months ago)
• Language: MATLAB
• Size: 12.4 MB
• Stars: 89
• Watchers: 9
• Forks: 45
• Open Issues: 8
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

• awesome-bids - DICM2NII
• awesome-dicom - dicm2nii - Convert DICOM into NIfTI. It can also convert PAR/XML/REC, HEAD/BRIK, MGZ and BrainVoyager files into NIfTI. (Libraries / MATLAB)

README

        
# DICOM to NIfTI conversion, DICOM and NIfTI tools, NIfTI visualization (version 2024.08.21)

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[![Open in MATLAB Online](https://www.mathworks.com/images/responsive/global/open-in-matlab-online.svg)](https://matlab.mathworks.com/open/github/v1?repo=xiangruili/dicm2nii)

# dicm2nii

Convert DICOM into NIfTI. It can also convert PAR/XML/REC, HEAD/BRIK, MGZ and BrainVoyager files into NIfTI.

# nii_tool

Create, load, save NIfTI file. Support both version 1 and 2 NIfTI, and variety of data type.

# nii_viewer

Visualize NIfTI. Can also visualize any file convertible to NIfTI by dicm2nii.

# nii_coreg

Affine registration of images with the same modality.

# nii_deface

Removes face and neck structure from T1w/T2w NIfTI.

# nii_moco

Perform motion correction on a NIfTI.

# nii_stc

Perform slice timing correction on a NIfTI.

# nii_xform

Transform a NIfTI into different resolution, or into a template space.

# dicm_hdr, dicm_img, dicm_dict, dicm_save, dicm_val_rep

Read/write DICOM header and image, independent of Matlab Image Processing Toolbox. 

# rename_dicm, sort_dicm, anonymize_dicm

DICOM tools performing the tasks as indicated by the name.

# RT_moco

Real time motion/image monitor and more for Siemens scanner.