https://github.com/xx19941215/batch-shovill-assemblies

shovill批量执行脚本 Batch Shovill can help you execute shovill batch assemblies.
https://github.com/xx19941215/batch-shovill-assemblies

bacterial-genomes functional-assignment gene-finding genome-annotation shovill

Last synced: 5 days ago
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shovill批量执行脚本 Batch Shovill can help you execute shovill batch assemblies.

• Host: GitHub
• URL: https://github.com/xx19941215/batch-shovill-assemblies
• Owner: xx19941215
• Created: 2021-05-30T15:43:51.000Z (over 3 years ago)
• Default Branch: master
• Last Pushed: 2022-11-24T01:49:57.000Z (about 2 years ago)
• Last Synced: 2023-03-11T21:11:12.252Z (almost 2 years ago)
• Topics: bacterial-genomes, functional-assignment, gene-finding, genome-annotation, shovill
• Language: Go
• Homepage:
• Size: 6.7 MB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Batch Shovill Assemblies

shovill批量执行脚本 Batch Shovill can help you execute shovill batch assemblies.

# Useage

You only need to specify two parameters, dataPath and outPath.

For example:

```

./batch-shovill-linux-amd64 -dataPath=/path/to/data -outPath=/path/to/out

```

The file name format example of the source file has been given in the [data directory](data).

Note: The folder cannot include any file other than the source file, such as. DS_ Store these invisible files.

# Cross platform

You can use this program directly on Linux, Windows and Mac, as long as your device has [Shovill](https://github.com/tseemann/shovill) installed.

[Windows](batch-shovill-windows-amd64)

[Mac](batch-shovill-mac-amd64)

[Linux](batch-shovill-linux-amd64)