https://github.com/yamaton/zsh-completions-bio

Missing zsh shell completion scripts for bioinformatics tools
https://github.com/yamaton/zsh-completions-bio

Last synced: 1 day ago
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Missing zsh shell completion scripts for bioinformatics tools

• Host: GitHub
• URL: https://github.com/yamaton/zsh-completions-bio
• Owner: yamaton
• License: mit
• Created: 2022-02-18T03:36:30.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2024-10-29T18:11:31.000Z (8 days ago)
• Last Synced: 2024-10-29T20:17:51.458Z (8 days ago)
• Language: Python
• Homepage:
• Size: 1.92 MB
• Stars: 9
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
## About

This repository contains zsh shell completion scripts for bioinformatics tools.

![zsh-completions-no-window](https://user-images.githubusercontent.com/256288/154776190-a4991546-1af7-4c50-95d5-8f6872464992.svg)

## List of supported bioinformatics commands

Please refer to [the list](https://github.com/yamaton/h2o-curated-data/blob/main/bio.txt).

## Install

1. Add following lines to `.zshrc`. This script adds `~/.zsh/zsh-completions-bio/completion` to zsh's search paths, and sets the color of completion suggestions.

```shell

## --------------------------------------------------------------------------

##   zsh-completions-bio

fpath=( ~/.config/zsh/zsh-completions-bio/completions "${fpath[@]}" )

autoload -Uz compinit; compinit

zstyle ':completion:*' use-cache on

zstyle ':completion:*' cache-path ~/.config/zsh/cache

## Colors of completion suggestions

## https://stackoverflow.com/questions/23152157/how-does-the-zsh-list-colors-syntax-work

##

## 256 color palette

## 1;38;5;142  ... 256 color palette (142 )  # https://www.ditig.com/256-colors-cheat-sheet

##

## CLI_COLOR

##  0 ... default

## 30 ... black

## 31 ... red      91 ... light red

## 32 ... green    92 ... light green

## 33 ... yellow   93 ... light yellow

## 34 ... blue     94 ... light blue

## 35 ... magenta  95 ... light magenta

## 36 ... cyan     96 ... light cyan

## 37 ... white

## 41   ... red (background)

## 1;31 ... red (bold)

##

zstyle ':completion:*' list-colors '=(#b)*(--)( *)=37=1;38;5;103=1;38;5;142' '=*=0'

## --------------------------------------------------------------------------

```

2. Clone this repository under `~/.config/zsh`:

```shell

mkdir -p ~/.config/zsh

cd ~/.config/zsh

git clone https://github.com/yamaton/zsh-completions-bio.git

```