https://github.com/zachcp/qiime-tools
utilities for Qiime workflows
https://github.com/zachcp/qiime-tools
Last synced: over 1 year ago
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utilities for Qiime workflows
- Host: GitHub
- URL: https://github.com/zachcp/qiime-tools
- Owner: zachcp
- Created: 2015-03-19T21:31:37.000Z (about 11 years ago)
- Default Branch: master
- Last Pushed: 2016-07-25T23:41:07.000Z (almost 10 years ago)
- Last Synced: 2025-02-24T04:13:03.574Z (over 1 year ago)
- Language: Python
- Size: 720 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: Readme.md
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README
### Tools for Working with Barcoded Amplicons.
###install
```[python]
pip install --editable .
```
#### Current Commands
The following are the current list of commands. At this point we do not guarantee this will stay around. We are in the process
of pruning unused commands that are not essential.
- demultiplexfasta
- demultiplexfasta_parallel
- fastqconcat
- filterfasta_by_length
- split_fastq_by_name
- split_fasta_by_name
- merge_OTU_UC
- taxtable_to_otutable
- UCfiles_to_taxtable
- UCfile_to_taxtable