https://github.com/zietzm/phenotype_standardization

https://github.com/zietzm/phenotype_standardization/wiki
https://github.com/zietzm/phenotype_standardization

medical-informatics pharmacovigilance phenotypes

Last synced: 3 months ago
JSON representation

https://github.com/zietzm/phenotype_standardization/wiki

• Host: GitHub
• URL: https://github.com/zietzm/phenotype_standardization
• Owner: zietzm
• Created: 2020-06-09T16:18:12.000Z (almost 5 years ago)
• Default Branch: master
• Last Pushed: 2020-07-01T15:47:58.000Z (almost 5 years ago)
• Last Synced: 2025-01-13T01:34:42.240Z (4 months ago)
• Topics: medical-informatics, pharmacovigilance, phenotypes
• Language: Python
• Homepage:
• Size: 57.6 KB
• Stars: 4
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

README

        
# Standardized phenotypes library

[![GitHub Actions Wiki CI](https://img.shields.io/github/workflow/status/zietzm/phenotype_standardization/Update%20and%20publish%20wiki?label=Build%20Wiki&logo=github&style=for-the-badge)](https://github.com/zietzm/phenotype_standardization/actions)

See https://github.com/zietzm/phenotype_standardization/wiki for formatted phenotypes with explanations.

`.sql` files for each phenotype can be found in the repository folders.

---

Current definitions are specific to the Tatonetti lab database schema.

In the future we hope to add more OMOP definitions that would be more broadly applicable.

The wiki for this repository is **built automatically**.

Rather than edit the wiki, please modify source files.