https://github.com/zmactep/ighumanizer2
https://github.com/zmactep/ighumanizer2
Last synced: 12 months ago
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- Host: GitHub
- URL: https://github.com/zmactep/ighumanizer2
- Owner: zmactep
- Created: 2013-05-14T08:37:42.000Z (about 13 years ago)
- Default Branch: master
- Last Pushed: 2013-06-10T14:46:34.000Z (about 13 years ago)
- Last Synced: 2025-04-04T09:21:31.057Z (about 1 year ago)
- Language: Python
- Size: 1.82 MB
- Stars: 1
- Watchers: 0
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
Immunoglobulin Analys and Humanization Tools
============================================
Overview
--------
This is not an old ighumanizer. This tool was rewrited, so there are not any humanization tools here, 'cause they integrate hard with new version. They will be
added soon.
Installation
------------
1. Download NCBI IgBLAST from IgBLAST ftp: ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/
2. Put it to 'ncbi-blast' directory.
3. Download additional NCBI databases and put it to 'database' directory.
4*. Run etc/dbalias_creation.sh, if you want to export human proteins from 'nr' database to new 'nr_human' database. You need BLAST+ to be installed.
igblastp
--------
Some text here
region_finder
-------------
Some text here
homologs
--------
Some text here
filter_fasta
------------
Some text here