Projects in Awesome Lists tagged with alignments

https://github.com/steineggerlab/foldseek

Foldseek enables fast and sensitive comparisons of large structure sets.

alignments bioinformatics clustering protein-structure

Last synced: 05 Oct 2025

https://github.com/litefeel/unity-aligntools

Align Tools is just perfect Unity asset plugin to align gui object

align alignment alignments distribute resize unity-editor unity3d-plugin

Last synced: 17 Jul 2025

https://github.com/litefeel/Unity-AlignTools

Align Tools is just perfect Unity asset plugin to align gui object

align alignment alignments distribute resize unity-editor unity3d-plugin

Last synced: 25 Apr 2025

https://github.com/nellore/rail

Scalable RNA-seq analysis

alignments emr ipython mapreduce rail-rna rna-seq-analysis

Last synced: 09 Apr 2025

https://github.com/bcgsc/hlaminer

⛏ HLA predictions from NGS shotgun data

alignments hla-prediction hla-sequence oxford-nanopore shotgun-sequence-datasets targeted-assemblies

Last synced: 20 Jul 2025

https://github.com/telatin/covtobed

⛰ covtobed | Convert the coverage track from a BAM file into a BED file

alignments bam-files bed bioconda bioinformatics bioinformatics-tool sequence-coverage

Last synced: 26 Feb 2026

https://github.com/aquaskyline/mica-aligner

MICA-aligner is a new short-read aligner that is optimized in view of MIC's limitation and the extra parallelism inside each MIC core.

aligner alignments bioinformatics computational-biology intel-mic

Last synced: 11 Jul 2025

https://github.com/gagniuc/jupiter-bioinformatics-v2-experiments

Jupiter Bioinformatics (V2) uses the local sequence alignment algorithm and a few stored experiments for further experimentation on sequence alignment. It is an open source application designed in native JavaScript, that is able to align two sequences/texts in order to match the regions that are similar.

alignments bioinformatics heatmap javascript local sequence

Last synced: 07 Jun 2026

https://github.com/t-neumann/versalignlib

Showcase of parallelization technologies using sequence alignment algorithms

alignments amd-opencl avx benchmark cmake needleman-wunsch opencl openmp openmp-support parallel-computing parallelization showcase smith-waterman sse

Last synced: 04 Apr 2025

https://github.com/bcgsc/dida

DIDA Project

alignments distributed-indexing indexing large-scale-indexing mpi

Last synced: 05 Jul 2025

https://github.com/applicativesystem/go-alignment-proportion

golang for estimating the genome site proportion

alignment-algorithms alignments bioinformatics genome-analysis genome-analysis-annotation phylogenetic-analysis phylogenetic-comparative-methods phylogenomics phylogenomics-bioinformatics

Last synced: 30 Oct 2025

https://github.com/sablokgaurav/graphanalyzer

graphanalyzer python package for dealing with paf and gfa alignments.

alignments bioinformatics genomes graphalignments graphs graphs-algorithms machinelearning

Last synced: 31 Jul 2025

https://github.com/ammahmoudi/introductiontobioinformatics

Homework Solutions for Introduction to Bioinformatics Course as Computer Science B.Sc. Student at Department of Computer Engineering, Sharif University of Technology

alignments bioinformatics rosalind-exercises

Last synced: 06 Jul 2025

https://github.com/g-insana/proteomecluster

NextFlow pipelines and Python scripts for comprehensive analyses of proteomes data, providing: Clustering via MMseqs2; Labelling, filtering and aggregation of clusters; Alignments and Variation analyses; Meta clustering comparisons

alignments mmseqs2 nextflow-pipeline proteome proteome-clustering proteomes variation variome