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https://github.com/AdmiralenOla/Scoary

Pan-genome wide association studies

bacteria gene-presence-absence genomics gwas pan-genome

Last synced: 01 Aug 2024

https://github.com/kjolley/BIGSdb

Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.

bacteria bioinformatics database genomes mlst typing

Last synced: 01 Aug 2024

https://github.com/johnlees/seer

sequence element (kmer) enrichment analysis

bacteria gwas k-mer

Last synced: 01 Aug 2024