Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with bioimage-analysis
A curated list of projects in awesome lists tagged with bioimage-analysis .
https://github.com/qupath/qupath
QuPath - Bioimage analysis & digital pathology
bioimage-analysis bioimage-informatics cell-analysis cell-segmentation computational-pathology digital-pathology groovy histology image-processing imagej javafx machine-learning opencv pathology tissue-microarray-analysis whole-slide-imaging
Last synced: 26 Sep 2024
https://github.com/stardist/stardist
StarDist - Object Detection with Star-convex Shapes
bioimage-analysis cell-segmentation deep-learning nuclei-segmentation object-detection python
Last synced: 02 Aug 2024
https://github.com/mahmoodlab/CONCH
A vision-language foundation model for computational pathology - Nature Medicine
bioimage-analysis bioimage-informatics computational-pathology conch digital-pathology foundation-model health-informatics histopathology mahmoodlab medical-imaging nature-medicine nlp-machine-learning pathology quantitative-pathology vision-language-pathology
Last synced: 02 Aug 2024
https://github.com/kreshuklab/plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
bioimage-analysis bioinformatics deep-learning image-segmentation neural-network segmentation unet
Last synced: 03 Aug 2024
