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An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with bioimage-informatics
A curated list of projects in awesome lists tagged with bioimage-informatics .
https://github.com/mahmoodlab/clam
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
bioimage-informatics camelyon16 camelyon17 clam computational-pathology data-efficient deep-learning digital-pathology histopathology mahmoodlab pathology quantitative-pathology tcga-data weakly-supervised-learning whole-slide-imaging
Last synced: 01 Oct 2024
https://github.com/mahmoodlab/CLAM
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
bioimage-informatics camelyon16 camelyon17 clam computational-pathology data-efficient deep-learning digital-pathology histopathology mahmoodlab pathology quantitative-pathology tcga-data weakly-supervised-learning whole-slide-imaging
Last synced: 02 Aug 2024
https://github.com/qupath/qupath
QuPath - Bioimage analysis & digital pathology
bioimage-analysis bioimage-informatics cell-analysis cell-segmentation computational-pathology digital-pathology groovy histology image-processing imagej javafx machine-learning opencv pathology tissue-microarray-analysis whole-slide-imaging
Last synced: 26 Sep 2024
https://github.com/DigitalSlideArchive/HistomicsTK
A Python toolkit for pathology image analysis algorithms.
bioimage-informatics computer-vision digital-slide-archive histology machine-learning medical-image-processing python
Last synced: 02 Aug 2024
https://github.com/mahmoodlab/CONCH
A vision-language foundation model for computational pathology - Nature Medicine
bioimage-analysis bioimage-informatics computational-pathology conch digital-pathology foundation-model health-informatics histopathology mahmoodlab medical-imaging nature-medicine nlp-machine-learning pathology quantitative-pathology vision-language-pathology
Last synced: 02 Aug 2024
https://digitalslidearchive.github.io/digital_slide_archive/
The official deployment of the Digital Slide Archive and HistomicsTK.
bioimage-informatics digital-slide-archive hacktoberfest histology histomicstk
Last synced: 02 Aug 2024