Projects in Awesome Lists tagged with bioinformatics-data
A curated list of projects in awesome lists tagged with bioinformatics-data .
https://github.com/nicgirault/circosJS
d3 library to build circular graphs
big-data bigdata bioinformatics bioinformatics-data circos circos-graphs circular d3js javascript
Last synced: 07 May 2025
https://github.com/nicgirault/circosjs
d3 library to build circular graphs
big-data bigdata bioinformatics bioinformatics-data circos circos-graphs circular d3js javascript
Last synced: 09 Apr 2025
https://github.com/multiqc/test-data
Test data for MultiQC.
bioinformatics bioinformatics-data multiqc test-data
Last synced: 02 Mar 2025
https://github.com/biojulia/readdatastores.jl
Datastores for reads, not your papa's FASTQ files.
bam-files bam-format bioinformatics bioinformatics-data biojulia biology fastq fastq-files fastq-format files format genomics genomics-data sam-bam sam-file sam-files sequencing storage
Last synced: 12 Oct 2025
https://github.com/emir-munoz/adr-prediction
Supplemental material for the paper "Facilitating Prediction of Adverse Drug Reactions by Using Knowledge Graphs and Multi-Label Learning Models".
bioinformatics-data datasets knowledge-graph machine-learning multilabel research-paper
Last synced: 24 Apr 2025
https://github.com/karthiksoman/biomixqa
Repository for BiomixQA benchmark dataset
benchmark-datasets bioinformatics bioinformatics-data biomedical-informatics gpt large-language-models llama retrieval-augmented-generation
Last synced: 17 Nov 2025
https://github.com/sciencegenome/bedtools-pangenome-intersect
rust pangenome bedtools intersect
bedtools bedtoolsintersect bioinformatics bioinformatics-data genome-analysis genome-sequencing pangenome pangenome-graph
Last synced: 01 Aug 2025
https://github.com/gabywald/phylogenetik
An old Phylogenetik Project (2007) in JAVA, with (some) phylogeny, bioinformatics algorithms, matrix implementations and comparisons, PAM and BLOSUM (extract from http://gabriel.chandesris.free.fr/projets/Phylogenetik/ )
bioinformatics bioinformatics-algorithms bioinformatics-data bioinformatics-tool biology java javaswing student student-project student-work
Last synced: 05 Mar 2025
https://github.com/sciencegenome/fastp-clipped
rust implementation of the tilled window approach
bioinformatics bioinformatics-analysis bioinformatics-data genome-analysis genome-annotation illumina-sequencing
Last synced: 12 Jun 2025
https://github.com/applicativesystem/rust-fastp-clipped
rust implementation of the tilled window approach
bioinformatics bioinformatics-analysis bioinformatics-data genome-analysis genome-annotation illumina-sequencing
Last synced: 15 Aug 2025
https://github.com/applicativesystem/pangenome-genome-assembly
bash based pangenome assembly from short and long reads
bioinformatics bioinformatics-data genome-analysis genome-assembly genome-assembly-evaluation pangenome
Last synced: 15 Aug 2025
https://github.com/omicscode/genomeassembly-pacbiohifi
pacbioHifi genome assembly benchmarks
bioinformatics bioinformatics-data genome-alignment genome-analysis genome-assembly genome-sequencing pacbio-data pacbio-sequencing
Last synced: 06 Oct 2025
https://github.com/sensodevices/motor-skills-rehab-research-kit
Contains a sample dataset with rehab sessions of stroke victims and data preparation example
bioinformatics bioinformatics-data bioinformatics-tool motor-skills rehab rehabilitation rehabilitation-system
Last synced: 07 Oct 2025
https://github.com/ibchgenomic/genomeassembly-pacbiohifi
pacbioHifi genome assembly benchmarks
bioinformatics bioinformatics-data genome-alignment genome-analysis genome-assembly genome-sequencing pacbio-data pacbio-sequencing
Last synced: 18 Mar 2025
https://github.com/applicativesystem/go-diamond-sequence-hints
extracting the aligned portions from the diamond aligner by read alignment of pacbio reads to the proteins.
bioinformatics bioinformatics-data genome-analysis genome-annotation genomealignment genomeannotation
Last synced: 03 Apr 2025
https://github.com/david4096/sheepdog-exporter
Export metadata from the DCP sheepdog API. 🐑🐑
bioinformatics-data nihdatacommons
Last synced: 06 Jul 2025
