Projects in Awesome Lists tagged with biomedical-engineering

https://github.com/BMClab/BMC

Notes on Scientific Computing for Biomechanics and Motor Control

biomechanics biomedical-engineering jupyter-notebook motor-control python scientific-computing

Last synced: 04 May 2025

https://github.com/imsanjoykb/electrical-and-electronic-engineering-course-materials

Electrical And Electronic Engineering Course Materials

biomedical-engineering circute-design-course control-systems-engineering course-materials eee-ourse eee-semester-course electrical-engineering electronics-engineering fabrication handnote power-syetem-protection power-system solid-state-device vlsi vlsi-circuits vlsi-course

Last synced: 21 Mar 2025

https://github.com/braph-software/BRAPH-2

BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.

biomedical-engineering brain-connectivity-analysis brain-research computational-neuroscience connectomics data-analysis data-science data-visualization deep-learning graph-theory machine-learning matlab network-analysis neuroimaging neuroscience open-source reproducible-research research-tools scientific-software toolbox

Last synced: 01 May 2025

https://github.com/EIT-team/Stroke_EIT_Dataset

Processing and directory structure for Stroke EIT Dataset

biomedical-engineering brain-imaging dataset eit electrical-impedance-tomography stroke

Last synced: 15 Mar 2025

https://github.com/reubn/ecg

Portable WiFi Connected IoT ECG Monitor 📈💕

ad8232 bioengineering biohacking biomedical-engineering bpm cardiology ecg esp8266 health healthcare heart heartrate iot js medicine quantified-self react vx wearable websockets

Last synced: 03 Aug 2025

https://github.com/thecoderpinar/nanodna-nanorobot-simulation

nanoDNA-nanoROBOT-simulation: Open-source Python project for modeling and simulating DNA-based nanorobot behavior. 🧬🤖

algorithms artificial-intelligence bioengineering bioinformatics biomedical-engineering computational-biology computational-modeling data-analysis dna machine-learning molecular-biology nanotechnology neural-networks open-source python science simulation

Last synced: 30 Apr 2025

https://github.com/zm-cttae/matlab-trimesh-stereo-reconstruction

MATLAB stereo reconstruction to 3DP tessellated mesh (STL)

3d-printing 3d-reconstruction biomedical-engineering computer-vision data-visualization dissertation image-processing interpolation-methods matlab mechanical-engineering medical-imaging mesh-generation stereo-calibration stereo-reconstruction stereo-vision thesis

Last synced: 22 Apr 2025

https://github.com/davidai2024/druggeneexplorer

This Python script is designed to provide detailed information on interactions between drugs and genes using the Sydney module for natural language processing and the Drug Gene Interaction Database (DGIdb) API. Users can input the names of three drugs separated by commas and receive information on the interactions with the corresponding genes.

bing bioinformatics bioinformatics-tool biomedical biomedical-engineering biomedical-informatics chatgpt copilot drugs edgegpt gpt gpt-4 interaction medicines python

Last synced: 16 Apr 2025

https://github.com/sweetpand/tensorflow_best_practices

Biomedical Image Analysis with TensorFlow and DLTK

biomedical-engineering biomedical-image-analysis biomedical-image-processing biomedical-signal-processing dltk tensorflow tensorflow-experiments tensorflow-lite tensorflow-models tensorflow-mri

Last synced: 02 Apr 2025

https://github.com/arturomoncadatorres/breathing-rate-rsa

Implementation of the methods used to calculate (average) respiratory rate from heart rate variability as shown in the paper by Schafer and Kratky (2008).

biomedical-data-science biomedical-engineering breathing-rate ecg ecg-signal respiratory-rate signal-processing wearables

Last synced: 31 Oct 2025

https://github.com/wickdchromosome/joint_stress_calculator

This is a joint stress calculator for a lateral shoulder raise. It calculates specific stress values for both the deltoidal muscle group, as well as the glenohumeral joint.

biology biomedical-engineering exercise python3 stress-simulations

Last synced: 16 Mar 2025

https://github.com/rcv911/periodogram

Draw periodogram of real EEG data

analysis biomedical-data-science biomedical-engineering biosignals eeg eeg-analysis eeg-data eeg-signals periodogram

Last synced: 18 Jan 2026

https://github.com/reshalfahsi/msgnet

Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation

biomedical-engineering biomedical-image-analysis biomedical-image-processing image-segmentation medical-image-segmentation pytorch

Last synced: 19 May 2026

https://github.com/supreme-gg-gg/neurosteady

Hand tremor intervention in neurosurgery using few-shot transfer learning with CNN-LSTM and closed-loop servo actuator

biomedical-engineering eeg machine-learning neuroscience neurotechnology surgical-tools tremor-detection

Last synced: 27 Oct 2025

https://github.com/tempehs/tempehs_ardunio_boilerplate

A collection of code snippets, libraries, 3D models and resources for Arduino mechatronics.

arduino biomedical-engineering cplusplus electronics mechatronics micocontroller

Last synced: 11 Mar 2026

https://github.com/timkong21/voice-commander-system

A voice-activated command system designed to help quadriplegic individuals control their environment wirelessly. Utilizing voice recognition and RF communication, this simple yet effective setup allows users to operate devices such as door openers, improving independence without physical intervention.

accessibility arduino assistive-technology biomedical-engineering c-plus-plus home-automation quadriplegic radio-frequency voice-assistant voice-commands voice-control

Last synced: 15 May 2026

https://github.com/reshalfahsi/contrastive-ssl-pathology

Self-Supervised Contrastive Learning for Colon Pathology Classification

biomedical-engineering biomedical-image-processing contrastive-learning image-classification medical-image-analysis pathology-image self-supervised-learning

Last synced: 29 May 2026

https://github.com/singhofen/lis-integration-monitor

A Streamlit-based CE‑IT dashboard for HL7 parsing, LIS turnaround analytics, device connectivity monitoring, and LIS‑style PM tracking.

analytics biomedical-engineering ce-it clinical-engineering csv csv-parser dashboard healthcare-it-medical-software hl7 hl7-parser laboratory-integration laboratory-integration-scripts lis medical-devices pm-tracking python scripting streamlit

Last synced: 08 Jun 2026

https://github.com/maro-michailidou/bme-medical-robotics-team-a

For the BME MSc of Auth, in the subject of Medical Robotics, the assignment of Team A, was the mathematical description of a 4DOF robotic finger. Matlab was used to create a GUI, and an MQTT server in order to communicate with Team B who created the corresponding model in Unity.

biomedical-engineering matlab-gui modelling-biological-systems mqtt

Last synced: 19 Jan 2026

https://github.com/ashvinhandoo/bionic-lab-projects

Computational neurophysiology pipelines for analyzing astrocyte and vascular dynamics. Includes Python- and MATLAB-based analysis frameworks for modeling calcium, vasomotion, and pupil-linked activity, demonstrating advanced signal processing, transfer entropy estimation, and data visualization skills used in biomedical research.

biocomputation bioinformatics biomedical-engineering computational-biology data-analysis matlab neuroscience python signal-processing time-series

Last synced: 18 May 2026

https://github.com/mrsudo404/disease_prediction_machinelearning_matlab

A Machine Learning project using MATLAB to predict diabetes using Logistic Regression and SVM. Includes GUI, accuracy metrics, and confusion matrix.

biomedical-engineering matlab matlab-application students-project

Last synced: 26 Jun 2025

https://github.com/arsham-lh/medical-devices

Implementation and simulation of circuits for medical devices using Proteus and other tools

biomedical-engineering filter-design proteus stethoscope

Last synced: 07 Mar 2026

https://github.com/ccoolbaugh/frontphysiol_coolbaugh_cooling_protocol

Code and data to recreate figures and analyses for our Frontiers Integrative Physiology methods paper describing an individualized, perception-based cooling protocol.

biomedical-engineering brown-adipose-tissue cold-exposure r r-markdown reproducible-research shivering skin-temperature thermoregulation

Last synced: 18 Aug 2025

https://github.com/manuelmariscal/biomedical_workshops

This repo is focused on movement analysis workshops, mainly using computational vision and AI, repo is still a work in progress.

biomedical-engineering computational-vision movement-analysis

Last synced: 16 May 2025

https://github.com/cmccomb/map-of-bme

biomedical-engineering carnegie-mellon-university embedding maps-of-cmu-research publication-repository tsne-visualization visualization

Last synced: 04 Apr 2026

https://github.com/nimaabediforud/heart-disease-prediction

The project highlights the end-to-end workflow of data preprocessing, model building, evaluation, and comparison for a healthcare prediction task.

biomedical-applications biomedical-data-science biomedical-engineering classification deep-learning machine-learning neural-networks numpy pandas prediction python seaborn sklearn tensorflow

Last synced: 15 Apr 2026

https://github.com/uutzinger/bme_ece_4_517

Code for Measurement and Data Analysis in Biomedical Engineering

biomedical-engineering course-materials labview

Last synced: 11 Oct 2025

https://github.com/youssof20/heart-rate-camera

Webcam remote photoplethysmography (rPPG): live heart rate in Python and the browser. MediaPipe forehead ROI, pulse bandpass, FFT BPM — with an open skin-tone accuracy study.

biomedical-engineering computer-vision health-monitoring heart-rate javascript mediapipe opencv photoplethysmography pulse-detection python rppg signal-processing webcam