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Projects in Awesome Lists tagged with biomedical-named-entity-recognition

A curated list of projects in awesome lists tagged with biomedical-named-entity-recognition .

https://github.com/baderlab/saber

Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not stable.

bioinformatics biomedical-named-entity-recognition biomedical-text-mining deep-learning information-extraction machine-learning spacy

Last synced: 12 Apr 2025

https://github.com/amzn/amazon-weak-ner-needle

Named Entity Recognition with Small Strongly Labeled and Large Weakly Labeled Data

bert biomedical biomedical-named-entity-recognition distant-supervision ner weak-supervision weakly-supervised-learning

Last synced: 28 Apr 2025

https://github.com/asyml/fortehealth

The project is in the incubation stage and still under development. ForteHealth is a flexible and powerful ML workflow builder for biomedical and clinical scenarios. This is part of the CASL project: http://casl-project.ai/

biomedical-named-entity-recognition clinical-nlp clinical-text-processing data-processing deep-learning information-retrieval machine-learning natural-language natural-language-processing python

Last synced: 02 May 2025

https://github.com/dmis-lab/conner

Bioinformatics'2023: Consistency Enhancement of Model Prediction on Document-level Named Entity Recognition

biomedical-named-entity-recognition conner consistency consistency-models named-entity-recognition

Last synced: 03 Sep 2025