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An open API service indexing awesome lists of open source software.

Projects in Awesome Lists tagged with blast

A curated list of projects in awesome lists tagged with blast .

https://github.com/evilc0deooo/PentesterSpecialDict

构建并优化高效的渗透测试字典集合，以提升网络安全从业人员的测试效率和效果。

blast boom burp dictionary fuzz fuzzing

Last synced: 03 Sep 2025

https://github.com/evilc0deooo/pentesterspecialdict

构建并优化高效的渗透测试字典集合，以提升网络安全从业人员的测试效率和效果。

blast boom burp dictionary fuzz fuzzing

Last synced: 15 May 2025

https://github.com/elasticsea/unity-fracture

Fracture any mesh at runtime

blast fracture nvidia rigidbody unity

Last synced: 13 Apr 2025

https://github.com/ElasticSea/unity-fracture

Fracture any mesh at runtime

blast fracture nvidia rigidbody unity

Last synced: 29 Apr 2025

https://github.com/mosuka/blast

Blast is a full text search and indexing server, written in Go, built on top of Bleve.

blast cluster docker go golang grpc index raft restful-api search search-engine

Last synced: 28 Sep 2025

https://github.com/tanghaibao/jcvi

Python library to facilitate genome assembly, annotation, and comparative genomics

allmaps assembly bioinformatics blast comparative-genomics genetic-maps genome-sequencing genomics sequence-alignments synteny variant-calling

Last synced: 14 May 2025

https://github.com/seqan/seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

bioinformatics blast cpp-concepts cpp20 fasta fastq fm-index modern samtools seqan sequence-alignment sequence-analysis

Last synced: 01 Mar 2026

https://github.com/wurmlab/sequenceserver

Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)

bioinformatics blast genomics genomics-visualization hacktoberfest javascript ruby sequence-alignment sequencing visualization

Last synced: 15 May 2025

https://github.com/seqan/lambda

LAMBDA – the Local Aligner for Massive Biological DatA

alignment bioinformatics blast blast-searches high-performance metagenomics ncbi-taxonomy protein-sequences seqan

Last synced: 28 Feb 2025

https://github.com/ncbi/elastic-blast

ElasticBLAST is a cloud-based tool to perform your BLAST searches faster and make you more effective

bioinformatics blast ncbi

Last synced: 04 Jul 2025

https://github.com/datasnakes/orthoevolution

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

bash bioinformatics biology biosql blast data-science ftp genetics ncbi orthologs orthologues orthology orthology-inference pbs phylogenetics python qsub sequence-alignment sge shell

Last synced: 15 Apr 2025

https://github.com/bebop/ark

Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL

api blast chembl genbank metabolic-engineering metabolic-network metabolic-pathways metabolomics rest-api rhea uniprot

Last synced: 11 Mar 2026

https://github.com/edinburgh-genome-foundry/genome_collector

:stars: Easily download genomes and build BLAST/Bowtie indexes in Python

bioinformatics blast bowtie ncbi python synbio synthetic-biology taxid

Last synced: 15 Jul 2025

https://github.com/sarthakmakhija/blast

Load generator for TCP servers.

blast golang load-generator tcp

Last synced: 14 Oct 2025

https://github.com/widdowquinn/2018-03-06-ibioic

Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.

bioinformatics biopython blast jupyter-notebook python teaching teaching-materials uniprot

Last synced: 08 Oct 2025

https://github.com/sing-group/biojs-vis-blasterjs

BlasterJS - an open source JS library to display Blast results

biojs blast blast-output-viewer bootstrap html2canvas javascript npm

Last synced: 13 May 2025

https://github.com/esteinig/brick

BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons :microbe:

bakta blast brig cds d3 genomad genomics html mge snps svg

Last synced: 07 Mar 2026

https://github.com/hng/biomolecularstructures.jl

The BiomolecularStructures package provides several Bioinformatics-related modules for Julia.

bioinformatics blast julia mafft pdb

Last synced: 14 Apr 2025

https://github.com/djhons/captchablasting

对存在验证码的站点爆破

blast captcha

Last synced: 12 Jan 2026

https://github.com/harryadel/blastjs

Standalone Meteor Packages

blast blastjs blaze meteor meteor-tracker tracker

Last synced: 12 Apr 2025

https://github.com/pwilmart/paw_blast

A utility for blasting one protein FASTA file against another FASTA file to find orthologs.

annotations blast proteomics python3

Last synced: 28 Oct 2025

https://github.com/althonos/pyncbitk

Cython bindings and Python interface to the NCBI C++ ToolKit (including BLAST+).

bioinformatics blast cython-library python-bindings python-library sequence-analysis

Last synced: 30 Dec 2025

https://github.com/bioinformatist/py3_scripts

Life is short, *****.

blast crawler gtf pacbio scrapy

Last synced: 24 Apr 2025

https://github.com/dillondaudert/proteindatasets

Creating and manipulating various protein sequence-structure datasets using Python, Julia, and other tools.

bioinformatics biopython blast dataset dssp fasta julia jupyter jupyter-notebook pandas protein psiblast python3 secondary structure tensorflow uniref50

Last synced: 10 Apr 2025

https://github.com/raghavagps/transfacpred

An ensemble method for predicting transcription factor in protein sequences

alignment-free bioinformatics blast hybrid-approach machine-learning-algorithms transcription-factors

Last synced: 31 Oct 2025

https://github.com/blinard-bioinfo/ncbitaxonomy

Tools to build a copy of the NCBI Taxonomy database in a local SQL schema and query it via a Java package.

blast blast-searches ncbi species-lists taxid taxonomy

Last synced: 06 Mar 2026

https://github.com/arx-tools/node-pkware

Node JS implementation of StormLib's Pkware compression/decompression algorithm

arx-fatalis blast compression explode implode pkware stormlib

Last synced: 21 Feb 2026

https://github.com/abdelhak-zaaim/bioblastautomation

bioBlastAutomation is a Python-based project designed to automate the process of performing BLAST search .

automation biology biopython blast django ncbi

Last synced: 29 Apr 2026

https://github.com/mgnfy-view/soho-orderbook

Soho is a central limit order-book protocol for high frequency, gasless trades on multiple chains including Blast

bitmap blast documentation eip712 forge foundry multi-chain natspec orderbook smart-contracts solidity trading

Last synced: 15 Oct 2025

https://github.com/averissimo/mass-blast

Workflow to accelerate the annotation of unkown coding sequences

bioinformatics blast fasta

Last synced: 03 Apr 2025

https://github.com/mathieu2301/blast-api

Allows you to use global 'serverless' events in JavaScript (Node or Web)

blast blast-api javascript

Last synced: 01 Jun 2026

https://github.com/tuliren/ncbi-blast-arm

NCBI BLAST+ arm build

arm blast docker

Last synced: 27 Apr 2026

https://github.com/sarthakmakhija/blast-core

Load generator for TCP servers.

blast golang load-generator tcp

Last synced: 29 Apr 2026

https://github.com/antonioalmeida/bioseq

🍀 bioseq - a Python package to handle biological sequences and perform common Bioinformatics operations.

bioinformatics biological-sequences bioseq blast fcup msa phylogenetics upgma

Last synced: 08 Oct 2025

https://github.com/bradfordcondon/diaglockpick

Quickly identify and generate primers for diagnostic loci

blast boinformatics genomics phylogenetics primers snps

Last synced: 27 Jan 2026

https://github.com/scipion-chem/scipion-chem-blast

Plugin to run blast in scipion

blast cheminformatics scipion

Last synced: 17 Jan 2026

https://github.com/jackburton-qub/grace

Genomic Repeat Analysis and Characterisation Engine

bioinformatics blast blastn microsatellite primer-design pyqt6 ssr

Last synced: 23 Apr 2026

https://github.com/glickmac/grab

Retrieve and create a custom BLAST database by taxonomic search

bacteria bacterial-database blast database genbank genes genome genomics grab-workflow protein

Last synced: 09 May 2026

https://github.com/ffstghc/blastscript

My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.

bioinformatics blast script

Last synced: 13 Jun 2026

https://github.com/cghiban/blast-wrapper

wrappers around blast tools to enable caching

bioinformatics blast caching

Last synced: 10 Mar 2026

https://github.com/gurdeep330/pdb_mapper

To map a given pair of motif-domain or domain-domain onto the best PDB complex

bioinformatics blast pdb python3

Last synced: 17 Jun 2026

https://github.com/veupathdb/service-multi-blast

Async BLAST+ query service and supporting libraries.

blast fasta library ncbi ncbi-blast query service

Last synced: 06 Aug 2025

https://github.com/abhiram-kandiyana/cuda-blast-2024

Reimplementation of NCBI BLAST with CUDA backend for faster retrieval

blast cuda gpu-acceleration parallel-processing

Last synced: 15 Mar 2025

https://github.com/fog-bank/localblast

Helper GUI tool to run BLAST locally and view the summary graphically

bioinformatics blast

Last synced: 25 May 2026

https://github.com/meeranhussain/blast_gnu_parallel

BLAST searches in parallel using GNU Parallel

assembly bash blast blastn genome-assembly python slurm-cluster

Last synced: 07 Feb 2026

https://github.com/gabrielramirezv/genome_assembly_annotation_and_comparative_analysis

Repository for the Genome Assembly, Annotation and Comparative Analysis class, from the Undergraduate Program in Genomic Sciences, UNAM.

assembly blast shell

Last synced: 02 Jan 2026

https://github.com/hendraaagil/wa-blast

WhatsApp bulk message sender using CSV.

blast bulk-message-sender sender whatsapp

Last synced: 18 May 2026

https://github.com/dombennett/om..blast

outsider-module: NCBI BLAST+

blast outsider-module

Last synced: 02 Apr 2025

https://github.com/hernanmd/blastqb

Blast Query Builder, part of the PhyloclassTalk software for Pharo Smalltalk

bioinformatics biosmalltalk blast ncbi-blast pharo pharo-smalltalk query query-builder user-interface

Last synced: 05 Oct 2025

https://github.com/georgiesamaha/proberemap

Map SNP positions to a supplied reference assembly using BLAST. Filter results for best hit. Output in plink format.

array blast blastn fasta genetics genomics genotype illumina map plink python3 snp

Last synced: 14 Sep 2025