Projects in Awesome Lists tagged with brainweb

https://github.com/nipy/nipype

Workflows and interfaces for neuroimaging packages

big-data brain-imaging brainweb data-science dataflow dataflow-programming neuroimaging python workflow-engine

Last synced: 21 Oct 2025

https://github.com/aramis-lab/clinica

Software platform for clinical neuroimaging studies

ants bids-format brainweb freesurfer fsl machine-learning mrtrix3 neuroimaging neuroscience python scikit-learn spm

Last synced: 07 Aug 2025

https://github.com/nipype/pydra

Pydra Dataflow Engine

brainweb dataflow-engine python3

Last synced: 01 May 2025

https://github.com/brainets/frites

Framework for Information Theoretical analysis of Electrophysiological data and Statistics

brainhack brainhack-marseille brainweb cluster-based electrophysiological-data ffx functional-connectivity gaussian-copula group-level information-theory institut-neurosciences-timone neurophysiological-data rfx statistics

Last synced: 01 May 2025

https://github.com/physiopy/phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

acqknowledge bids brainweb closember ge hacktoberfest labchart physiological-recordings physiological-signals physiology python3-library spike2

Last synced: 16 Jan 2026

https://github.com/anibalsolon/vscode-neuro-viewer

Check metadata and visualize neuroimages within VSCode.

brainweb data-visualization neuroimaging neuroscience nifti vscode vscode-extension

Last synced: 13 Apr 2025

https://github.com/ProjectPyRhO/PyRhO

A virtual optogenetics laboratory

brain brainweb brian2 computational-neuroscience jupyter-widget neuron neuroscience opsin optogenetics python

Last synced: 05 Apr 2026

https://github.com/remi-gau/ecobidas

Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist

brainweb checklist closember eeg eyetracking fmri meg mri neuroimaging positron-emission-tomography reproducibility reproducible-analysis transparency

Last synced: 09 Jul 2025

https://github.com/ColeLab/ActflowToolbox

The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.

activity-flow brain-connectivity brainweb fmri machine-learning neural-networks neuroimaging simulations

Last synced: 01 May 2025

https://github.com/PRIME-RE/RheMAP

Non-linear warps between common rhesus macaque brain templates

brainweb image-registration macaque mri nhp prime-dre template trainweb warp

Last synced: 01 May 2025

https://github.com/jajcayn/pygpso

Gaussian-Processes Surrogate Optimisation in python

bayesian-optimisation brainweb gaussian-processes gaussian-processes-surrogate gpflow neuroscience neuroscience-methods optimisation partition-tree python3 scale-biophysical-models space-partition-tree

Last synced: 25 Apr 2025

https://github.com/verificarlo/fuzzy

A fuzzy ecosystem for evaluating the stability of your computational tools.

brainweb floating-point fuzzy monte-carlo numerical-analysis stability

Last synced: 16 Jan 2026

https://github.com/ofgulban/slowest-particle-simulator-on-earth

A half-serious project to generate **very** serious brain explosions.

brainweb

Last synced: 31 Jan 2026

https://github.com/paquiteau/brainweb-dl

Brainweb Dataset downloader

brainweb dataset downloader mri phantom

Last synced: 16 Mar 2026

https://github.com/matteomancini/trampolino

TRAMPOLINO (TRActography Meta-Pipeline cOmmand LINe tOol) is a CLI for brain tractography. It leverages Nipype to offer an immediate way to reconstruct an orientation distribution function, use it to track the streamlines and eventually filter them, all using existing software toolboxes.

brainweb tractography

Last synced: 01 May 2025