Projects in Awesome Lists tagged with chip-seq-analysis
A curated list of projects in awesome lists tagged with chip-seq-analysis .
https://github.com/adeschen/consensusseeker
This R package compares genomic positions and genomic ranges from multiple experiments to extract common regions. The size of the analyzed region is adjustable as well as the number of experiences in which a feature must be present in a potential region to tag this region as a consensus region. Tested on ChIP-Seq peaks and nucleosome positions.
chip-seq-analysis genomic-data-analysis nucleosome-positioning r-package
Last synced: 18 Mar 2025
https://github.com/sivkri/schizosaccharomyces-pombe-chip-seq-analysis
After getting the bed file from the Peak calling, we can annotate and create all downstream analysis of two sets of data
chip-seq chip-seq-analysis chip-seq-data chip-seq-pipeline epigenetics epigenetics-data functional-genomics regulatory-elements schizosaccharomyces-pombe transcription-factors
Last synced: 22 Mar 2025
https://github.com/sebastian-gregoricchio/spacca
Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
chip-seq chip-seq-analysis chip-seq-callers chip-seq-data chip-seq-peaks chipseq copynumber gatk gatk4 macs macs2 mutation mutation-analysis mutations normalization somatic-indels somatic-mutations somatic-variant somatic-variants
Last synced: 31 May 2026
https://github.com/sebastian-gregoricchio/chip_zwart
ChIP-seq pipeline specific for the Zwart lab
chip-seq chip-seq-analysis chip-seq-pipeline chromatin epigenetics
Last synced: 31 May 2026