Projects in Awesome Lists tagged with chipseq
A curated list of projects in awesome lists tagged with chipseq .
https://github.com/ncbi/pm4ngs
Project Manager for NGS data analysis
bioinformatics chipexo chipseq cwl-workflow next-generation-sequencing ngs-analysis ngs-pipeline rnaseq
Last synced: 04 Jul 2025
https://github.com/mahshaaban/chromatin_segmentation_r
Package demo slides, "Chromatin Segmentation Analysis in R"
chipseq chromatin-segmentation hmm
Last synced: 13 Jun 2025
https://github.com/dogmaticcentral/progesterone
Which ESR1 and PGR binding sites are functional?
bed-files chipseq chipseq-region estrogen estrogen-receptor hand2 progesterone-resceptor progesterrone tad tf-binding-motif transcription-control transcription-factor-binding transcription-factor-binding-site
Last synced: 18 May 2026
https://github.com/sebastian-gregoricchio/spacca
Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
chip-seq chip-seq-analysis chip-seq-callers chip-seq-data chip-seq-peaks chipseq copynumber gatk gatk4 macs macs2 mutation mutation-analysis mutations normalization somatic-indels somatic-mutations somatic-variant somatic-variants
Last synced: 31 May 2026
https://github.com/mahshaaban/targetflow
target: An R Package to Predict Combined Function of Transcription Factors (workflow article)
chipseq r-package transcription-factors workflow
Last synced: 02 Mar 2026
https://github.com/mahshaaban/segmenternote
A technical note to describe the segmenter package
chipseq chromatine-segmentation histone-modifications
Last synced: 03 Mar 2026
