Projects in Awesome Lists tagged with common-workflow-language

Weaver: Workflow Execution Management Service (EMS); Application, Deployment and Execution Service (ADES); OGC API - Processes; WPS; CWL Application Package

ades common-workflow-language cwl ems ogc ogc-api-processes remote-execution web-application web-processing-service workflow wps

Last synced: 16 Jan 2026

https://github.com/otiai10/cwl.go

CWL (and input file) parser for Golang, used by github.com/otiai10/yacle

bioinformatics common-workflow-language cwl golang

Last synced: 15 Apr 2025

https://github.com/otiai10/yacle

Yet Another CWL Engine by Golang

bioinformatics common-workflow-language cwl

Last synced: 15 Apr 2025

https://github.com/common-workflow-language/cwltest

Framework for testing CWL tools and workflows

common-workflow-language cwl

Last synced: 19 Aug 2025

https://github.com/common-workflow-lab/ipython2cwl

IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.

common-workflow-language cwl docker jupyter jupyter-notebook

Last synced: 02 Feb 2026

https://github.com/tom-tan/ep3

A workflow engine for CWL that aims to have a pluggable architecture

common-workflow-language commonwl cwl workflow workflow-engine

Last synced: 14 Apr 2025

https://github.com/rabix/cwl-format

A very opinionated code formatter for CWL

code-formatter common-workflow-language cwl

Last synced: 21 Oct 2025

https://github.com/common-workflow-language/cwl-website

www.commonwl.org

common-workflow-language cwl

Last synced: 24 Oct 2025

https://github.com/sbg/tidycwl

Tidy Common Workflow Language Tools and Workflows

bioinformatics-pipeline common-workflow-language sevenbridges tidyverse

Last synced: 21 Feb 2026

https://github.com/tom-tan/cwl-template-for-vscode

A template to write CWL documents with VSCode with remote container extension

common-workflow-language commonwl cwl template vscode

Last synced: 13 Apr 2025

https://github.com/tom-tan/cwl-inspector

This tool provides a handy way to inspect properties of tools or workflows written in Common Workflow Language

common-workflow-language cwl

Last synced: 14 Apr 2025

https://github.com/tom-tan/cwl-mode

CWL mode for Emacs

common-workflow-language emacs

Last synced: 12 Jun 2025

https://github.com/tom-tan/zatsu-cwl-generator

Simple CWL document generator from given execution commands

common-workflow-language commonwl cwl dlang

Last synced: 12 Feb 2026

https://github.com/onnovalkering/cwl-rs

The Common Workflow Language (CWL) object model for Rust.

common-workflow-language cwl

Last synced: 03 Jan 2026

https://github.com/giannisdoukas/cwljnikernel

Jupyter Notebook Kernel for Common Workflow Language

common-workflow-language cwl jupyter-notebook workflows

Last synced: 07 Apr 2025

https://github.com/tom-tan/drill-hawk

A visualizer of workflow execution records for CWL

common-workflow-language commonwl cwl visualizer

Last synced: 25 Feb 2026

https://github.com/tom-tan/cwl-conformance-test-summarizer

Summarize the result of conformance test using cwltest

common-workflow-language conformance-tests cwl

Last synced: 27 Mar 2025

https://github.com/terradue/pycalrissian

Python client for Calrissian - CWL on kubernetes

common-workflow-language cwl kubernetes python

Last synced: 15 Mar 2025

https://github.com/msk-access/cwl_subworkflows

A list of subworkflows used for MSK-ACCESS data processing.

common-workflow-language cwl-workflow workflow

Last synced: 10 Feb 2026

https://github.com/giannisdoukas/ipython2cwl-demo

IPython2CWL Demo

common-workflow-language cwl jupyter-notebook

Last synced: 30 Jan 2026

https://github.com/nanxstats/sbpack-r

An R package to pack and upload CWL apps to Seven Bridges powered platforms

bioinformatics common-workflow-language cwl reticulate

Last synced: 24 Apr 2026

https://github.com/suzuki-shm/fastANI-in-cwl

Wrapper tool of fastANI by CWL and Docker

bioinformatics common-workflow-language cwl genome

Last synced: 10 Mar 2025

https://github.com/tom-tan/flycheck-cwl

Add on-the-fly checker for Common Workflow Language

common-workflow-language emacs

Last synced: 27 Mar 2025

https://github.com/nanxstats/cwl-formatter

Shiny app to format Common Workflow Language (CWL) apps

bioinformatics code-formatter common-workflow-language cwl reticulate shiny-apps

Last synced: 20 Apr 2026

https://github.com/common-workflow-lab/run-tests

Action for running tests for CWL workflows

common-workflow-language commonwl cwl testing

Last synced: 02 Feb 2026

https://github.com/common-workflow-lab/upload-conformance-badges

Action for uploading CWL conformance badges

common-workflow-language commonwl cwl

Last synced: 02 Feb 2026

https://github.com/suecharo/agodashi

An API server for parsing workflows written in workflow languages.

common-workflow-language workflow

Last synced: 28 May 2026

https://github.com/nanxstats/cwl-exploder

Shiny app to unpack monolithic CWL workflows

bioinformatics common-workflow-language cwl reticulate shiny-apps

Last synced: 16 Dec 2025

https://github.com/wtsi-hgi/cwl-dummy

Generates CWL files that do nothing.

common-workflow-language cwl

Last synced: 19 May 2026

https://github.com/stain/cwlprov-paper-gigascience

CWLProv paper submitted for GigaScience

common-workflow-language gigascience paper provenance research-object scientific-workflows workflow

Last synced: 29 Jan 2026

https://github.com/fairagro/M4.4_UC6_ARC

UC6 workflow in ARC proof-of-concept

common-workflow-language cwl fairagro

Last synced: 10 Mar 2025

https://github.com/common-workflow-lab/run-conformance-tests

Action for running CWL conformance tests

common-workflow-language commonwl cwl

Last synced: 02 Feb 2026

https://github.com/nanxstats/cwl-upgrader

Shiny app to upgrade Common Workflow Language (CWL) apps from sbg:draft2 to v1.0

bioinformatics common-workflow-language cwl reticulate shiny-apps

Last synced: 18 Apr 2026

https://github.com/eoap/machine-learning-process

Machine Learning Process using the EO Application Package

common-workflow-language inference machine-learning training

Last synced: 31 Jan 2026

https://github.com/tom-tan/conformance

Location to store the results of CWL conformance testing for ep3

common-workflow-language commonwl cwl

Last synced: 06 Jan 2026

https://github.com/tom-tan/core-wire

A tool/library to make CWL engines connected to remote resources

common-workflow-language commonwl library workflows

Last synced: 09 Feb 2026

https://github.com/ktaletsk/cwl-examples

common-workflow-language commonwl cromwell cwl

Last synced: 31 Jan 2026