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An open API service indexing awesome lists of open source software.

Projects in Awesome Lists tagged with cram

A curated list of projects in awesome lists tagged with cram .

https://github.com/samtools/htslib

C library for high-throughput sequencing data formats

bam bcf bioinformatics cram htslib ngs sam vcf

Last synced: 09 May 2025

https://github.com/samtools/htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

bam cram dna fasta genomics java java-api ngs sam sequencing vcf

Last synced: 14 May 2025

https://github.com/divonlan/genozip

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

23andme bam bgzip bwa compression cram fasta fastq genomics gvf gzip sam samtools vcf

Last synced: 05 May 2025

https://github.com/chrovis/cljam

A DNA Sequence Alignment/Map (SAM) library for Clojure

2bit bam bcf bed bigwig bioinformatics clojure cram fasta fastq genomics gff sam vcf wig

Last synced: 16 May 2025

https://github.com/sbslee/fuc

Frequently used commands in bioinformatics

api bam bed bioinformatics cli cram fasta fastq gff gtf maf sam vcf visualization

Last synced: 06 Apr 2025

https://github.com/gregzanch/cram

cram is a computational room acoustics module to simulate and explore various acoustic properties of a modeled space

acoustics computational-acoustics cram fdtd image-source-model ray-tracing raytracer room-acoustics room-impulse-response simulation webapp

Last synced: 20 Dec 2024

https://github.com/brentp/bpbio

basepair bio: a single binary with many useful genomics subtools.

bam cram genomics genomics-visualization high-throughput-sequencing structural-variation

Last synced: 11 Mar 2025

https://github.com/brentp/bedder-rs

an API for intersections of genomic data

bam bed bioinformatics cram genomics vcf

Last synced: 14 Feb 2025