Projects in Awesome Lists tagged with crispr

https://github.com/ctskennerton/minced

Mining CRISPRs in Environmental Datasets

Last synced: 21 Mar 2025

https://github.com/RicardoGEsteves/omniscient

Cutting-edge Full-stack AI Platform delivered as a SaaS (Software as a Service). Built on a robust technology stack, integrated with powerful APIs such as OpenAI and Replicate, offers a seamless experience for code generation, conversation simulation, image creation, music composition, and video generation.

axios clerk crispr nextjs openai postgresql prisma react react-hook-form react-hot-toast react-markdown replicate shadcn-ui stripe supabase tailwindcss typescript zod zustand

Last synced: 24 Mar 2025

https://github.com/ricardogesteves/omniscient

Cutting-edge Full-stack AI Platform delivered as a SaaS (Software as a Service). Built on a robust technology stack, integrated with powerful APIs such as OpenAI and Replicate, offers a seamless experience for code generation, conversation simulation, image creation, music composition, and video generation.

axios clerk crispr nextjs openai postgresql prisma react react-hook-form react-hot-toast react-markdown replicate shadcn-ui stripe supabase tailwindcss typescript zod zustand

Last synced: 09 Apr 2025

https://github.com/soedinglab/spacepharer

SpacePHARER CRISPR Spacer Phage-Host pAiRs findER

bioinformatics crispr host-pathogen sequence-analysis

Last synced: 27 Apr 2025

https://github.com/ctskennerton/crass

The CRISPR assembler

bioinformatics crispr

Last synced: 21 Mar 2025

https://github.com/rraadd88/beditor

A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more

base-editing crispr genome-wide-targeted-mutagenesis guide-rna-library

Last synced: 05 May 2025

https://github.com/emanuelgoncalves/crispy

Python module to analyse CRISPR-based libraries

crispr gaussian python sklearn

Last synced: 09 Feb 2025

https://github.com/bmds-lab/Crackling

CRISPR, faster, better – The Crackling method for whole-genome target detection

bioinformatics crispr crispr-analysis crispr-design efficacy issl specificity

Last synced: 05 May 2025

https://github.com/j-andrews7/crisprball

An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.

crispr crispr-screen data-visualization interactive-visualizations mageck plotly r screening shiny

Last synced: 28 Apr 2025

https://github.com/emanuelgoncalves/dtrace

Integration of pharmacological and drop-out CRISPR-Cas9 screens

bioinformatics crispr drug-targets

Last synced: 30 Apr 2025

https://github.com/althonos/diced

A Rust reimplementation of the MinCED method for identifying CRISPRs in full or assembled genomes.

bioinformatics crispr genomics python-bindings python-library rust-library

Last synced: 11 Apr 2025

https://github.com/epigen/macrophage-regulation

Integrated time series analysis and high-content CRISPR screening delineates the dynamics of macrophage immune regulation

atac-seq bioinformatics crispr crop-seq epigenomics immunology perturb-seq perturbations rna-seq scrna-seq systems-biology systems-immunology time-series transcriptomics

Last synced: 15 May 2025

https://github.com/therook/multiplexedplasmidbuilder

To combine and modify genbank files to construct multiplexed CRISPR plasmids.

biohacking biology biopython crispr python

Last synced: 26 Feb 2025

https://github.com/asistradition/getcrispry

CRISPR Target Design

crispr design guide rna

Last synced: 06 Mar 2025

https://github.com/mvinyard/vintools

Michael Vinyard's utilities

anndata bioinformatics chromatin-accessibility crispr gene-expression genomics google-cloud python single-cell

Last synced: 30 Apr 2025

https://github.com/sandialabs/cascollect

A pipeline for the detection of Cas genes and CRISPR arrays from unassembled raw illumina sequencing reads

crispr dna dna-seq protein rna scr-2420 seed-expansion

Last synced: 28 Feb 2025

https://github.com/chrisnelsonlab/crispr-tn5

Code for analysis of unbiased sequencing of CRISPR-mediated genome editing

crispr matlab tns

Last synced: 06 Apr 2025

https://github.com/sparanoid/usercss

My UserCSS

airtable bilibili bilibili-live chrome crispr firefox niconico plex stylus taobao usercss

Last synced: 03 Apr 2025

https://github.com/ofir-frd/analysis-of-ngs-data-for-crispr-hdr-experiments

Analysis of Next-Generation Sequencing(NGS) data for Clustered Regularly Interspaced Short Palindromic Repeats(CRISPR) Homology Directed Repair(HDR) experiments

crispr hdr ngs

Last synced: 01 Mar 2025