https://github.com/harmonydata/harmony

The Harmony Python library: a research tool for psychologists to harmonise data and questionnaire items. Open source.

ai data-harmonization data-science depression embedding embeddings foss harmonisation harmonization harmony help-wanted mental-health natural-language-processing nlp open-source psychology python research research-project social-sciences

Last synced: 06 Apr 2025

https://github.com/scai-bio/datastew

Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

data-harmonization data-stewardship large-language-models

Last synced: 30 Apr 2025

https://github.com/scai-bio/index

Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

data-harmonization data-stewardship embeddings large-language-models semantic-mapping

Last synced: 30 Mar 2025

https://github.com/scai-bio/kitsune

Kitsune is a next-generation data steward and harmonization tool.

data-harmonization data-stewardship embeddings large-language-models semantic-mapping

Last synced: 30 Apr 2025

https://github.com/scai-bio/tsnepad

AD & PD cohort variable distributions

alzheimers-disease data-harmonization parkinsons-disease t-sne visualization

Last synced: 30 Apr 2025

https://github.com/vida-nyu/bdi-viz

bdf-toolbox data-harmonization data-integration

Last synced: 05 May 2025

https://github.com/harmonydata/harmonyapi

This is the source code for the Harmony project REST API

anxiety data data-harmonisation data-harmonization data-science deep-learning depression first-timers-only gad-7 harmonisation harmonization harmony mental-health natural-language-processing neural-network nlp psychology research social-sciences wellcome

Last synced: 28 Dec 2024

https://github.com/harmonydata/harmony_examples

Example Jupyter notebook and R scripts using Harmony in real research problems

data data-harmonisation data-harmonization harmonisation psychology python r research

Last synced: 20 Dec 2024

https://github.com/scai-bio/ad-mapper

alzheimers-disease common-data-model data-harmonization

Last synced: 30 Mar 2025

https://github.com/dfornika/amrhike

Proof-of-concept for storing and querying harmonized AMR Genomic Analysis Results in datahike

antimicrobial-resistance clojure data-harmonization datahike triplestore

Last synced: 18 Mar 2025

https://github.com/harmonydata/harmonydata.github.io

Blog for NLP data harmonisation project Harmony, open source solution using Python for psychologists

data-harmonisation data-harmonization deep-learning github-pages harmony harmonydata hugo ssg static-site static-site-generator

Last synced: 18 Feb 2025

https://github.com/jcaperella29/clinical-text-mining_r_script

A lightweight R script for text mining and harmonizing medical phenotype data. Cleans, standardizes, and maps diagnoses to ICD-10 codes, with clinical annotations for enhanced data usability.

biomedical-data clinical-informatics data-cleaning data-harmonization database-integration icd-10 machine-learning medical-data nlp-machine-learning one-hot-encoding phenotype r text-mining

Last synced: 02 Mar 2025