https://github.com/yhoogstrate/bam-lorenz-coverage

Generate Lorenz plots and Coverage plots directly from BAM files

dna-seq ginicoverage lorenz ngs quality-control rna-seq wgs

Last synced: 20 Jan 2025

https://github.com/y9c/cutseq

✂️ Trim sequencing adapters from NGS data automatically

adapter barcode bioinformatics cutadapt dna-seq ngs rna-seq umi

Last synced: 06 May 2025

https://github.com/lumc/rna_cd

Detect RNA contamination in human Illumina DNA-seq experiments

bioinformatics dna-seq ngs quality-control

Last synced: 24 Mar 2025

https://github.com/sandialabs/cascollect

A pipeline for the detection of Cas genes and CRISPR arrays from unassembled raw illumina sequencing reads

crispr dna dna-seq protein rna scr-2420 seed-expansion

Last synced: 28 Feb 2025

https://github.com/wckdouglas/liftover_bam

bam-files dna-seq ngs-analysis rna-seq

Last synced: 28 Mar 2025