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Projects in Awesome Lists tagged with dnds

A curated list of projects in awesome lists tagged with dnds .

https://github.com/kullrich/msa2dist

MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis

bioconductor-package bioinformatics dnds dnds-estimation iupac kaks msa2dist multiple-sequence-alignment r score-matrix

Last synced: 03 Nov 2024

https://github.com/kullrich/crbhits

[CRBHits](https://github.com/kullrich/CRBHits) is a reimplementation of the Conditional Reciprocal Best Hit algorithm [crb-blast](https://github.com/cboursnell/crb-blast) in R.

bioinformatics dnds dnds-estimation joss kaks last pairwise-comparison r r-package reciprocal-blast-hits synteny

Last synced: 03 Nov 2024