Data

Tools

Indexes

Applications

Experiments

Awesome

An open API service indexing awesome lists of open source software.

Projects in Awesome Lists tagged with doi

A curated list of projects in awesome lists tagged with doi .

https://github.com/papis/papis

Powerful and highly extensible command-line based document and bibliography manager.

arxiv biblatex bibtex citation cli command-line command-line-tool crossref doi jabref libgen library mendeley papers papis publications scholar sci-hub tex zotero

Last synced: 08 Feb 2026

https://github.com/jimmc414/onefilellm

Specify a github or local repo, github pull request, arXiv or Sci-Hub paper, Youtube transcript or documentation URL on the web and scrape into a text file and clipboard for easier LLM ingestion

arxiv doi github ipynb llm papers pdf pmid pull-request repository sci-hub text tiktoken youtube-transcript-api

Last synced: 15 May 2025

https://github.com/titipata/pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

article doi medline-xml nlp parse parser pmid pubmed-central pubmed-parser python xml

Last synced: 14 May 2025

https://github.com/manubot/rootstock

Clone me to create your Manubot manuscript

citation continuous-publication doi manubot manuscript markdown publishing

Last synced: 03 Apr 2025

https://github.com/codemeta/codemeta

Minimal metadata schemas for science software and code, in JSON-LD

codemeta doi json-ld metadata schema science

Last synced: 16 Apr 2025

https://github.com/greenelab/scihub

Source code and data analyses for the Sci-Hub Coverage Study

crossref data-science doi journals libgen open-data sci-hub scimag scopus

Last synced: 09 Apr 2025

https://github.com/xlcnd/isbnlib

python library to validate, clean, transform and get metadata of ISBN strings (for devs).

biblatex bibliographic-references book csl-json doi ean13 endnote google-books isbn metadata open-library python

Last synced: 22 Feb 2026

https://github.com/dsfsi/covid19za

Coronavirus COVID-19 (2019-nCoV) Data Repository and Dashboard for South Africa

coronavirus covid-19 covid-data covid19 covid19-data dashboard data-science dataset doh doi dsfsi-datasets health nicd south-africa

Last synced: 04 Apr 2025

https://github.com/sckott/habanero

client for Crossref search API

api crossref-api doi metadata

Last synced: 15 May 2025

https://github.com/xlcnd/isbntools

python app/framework for 'all things ISBN' including metadata, descriptions, covers...

biblatex bibliographic-references doi ean13 endnote file-rename google-books isbn metadata microsoft-word open-library python wikipedia

Last synced: 30 Dec 2025

https://github.com/bibcure/scihub2pdf

Downloads pdfs via a DOI number, article title or a bibtex file, using the database of libgen(sci-hub) , arxiv

arxiv bibtex bibtexparser doi latex sci-hub science scientific-journals

Last synced: 09 Apr 2025

https://github.com/bibcure/bibcure

Bibcure helps in boring tasks by keeping your bibfile up to date and normalized...also allows you to easily download all papers inside your bibtex

abbreviation arxiv bib-files bibtex bibtexparser crossref doi doi-number libgen references sci-hub

Last synced: 07 Apr 2025

https://github.com/bibcure/doi2bib

get the bibtex string given a doi

bibtex bibtexparser crossref doi

Last synced: 06 Apr 2025

https://github.com/ropensci/rcrossref

R client for various CrossRef APIs

api api-wrapper crossref-api doi metadata r r-package rstats

Last synced: 04 Apr 2025

https://github.com/Tishacy/SciDownl

An unofficial api for downloading papers from SciHub via DOI, PMID, title

doi downloader paper pdf pmid scihub

Last synced: 07 Apr 2025

https://github.com/perrette/papers

Command-line tool to manage bibliography (pdfs + bibtex)

bibtex crossref doi filemanager google-scholar pdf

Last synced: 06 Apr 2025

https://github.com/kermitt2/biblio-glutton

A high performance bibliographic information service: https://biblio-glutton.readthedocs.io

bibliographical-references disambiguation doi hal metadata-api openaccess pubmed reference-matching

Last synced: 07 Oct 2025

https://github.com/michelecotrufo/pdf2doi

A python library/command-line tool to extract the DOI or other identifiers of a scientific paper from a pdf file.

arxiv arxiv-identifiers bibtex bibtex-entry doi extract extract-doi identifiers metadata pdf pdf-text pypdf2 python

Last synced: 16 May 2025

https://github.com/ropensci-archive/rorcid

:warning: ARCHIVED :warning: A programmatic interface the Orcid.org API

api-wrapper doi identifiers orcid orcid-api r r-package rstats scholarly-metadata

Last synced: 07 Apr 2025

https://github.com/shapr/fermatslastmargin

tool for creating and sharing annotations, using github for storage and social network

annotations doi research-paper

Last synced: 25 Aug 2025

https://github.com/beomi/cite.gg

🔍 우리가 읽을 논문을 찾아서, Cite.GG

arxiv doi research-tool

Last synced: 07 May 2025

https://github.com/michelecotrufo/pdf2bib

A python library/command-line tool to quickly and automatically generate BibTeX data starting from the pdf file of a scientific publication.

arxiv bibtex bibtex-entry bibtex-parser doi extract pdf pdf-files python

Last synced: 29 Oct 2025

https://github.com/mseri/doi2bib

Smalls CLIs to get a bibtex entries from a DOI, an arXiv ID or a PubMed ID and to pretty print bibtex entries (or files)

arxiv bibtex doi hacktoberfest ocaml

Last synced: 28 Feb 2026

https://github.com/greenelab/crossref

Download metadata for all DOIs using the Crossref API

crossref dataset doi metadata mongodb publishing python

Last synced: 05 May 2025

https://github.com/eblondel/zen4R

zen4R - R Interface to Zenodo REST API

api datacite depositions deposits doi fair r zenodo

Last synced: 30 Jul 2025

https://github.com/eblondel/zen4r

zen4R - R Interface to Zenodo REST API

api datacite depositions deposits doi fair r zenodo

Last synced: 30 Apr 2025

https://github.com/rougier/persid

Persistent identifier library for GNU Emacs

arxiv bibtex doi emacs isbn issn lisp pmcid pmid

Last synced: 30 Dec 2025

https://github.com/regexhq/doi-regex

Regular expression for matching DOIs

doi doi-regex regex regular-expression

Last synced: 02 Jan 2026

https://github.com/mdmower/doi-resolver

A browser extension to resolve and work with DOIs

doi doi-resolver

Last synced: 11 Feb 2026

https://github.com/sckott/serrano

Low level Ruby client for Crossref

api crossref-api doi metadata

Last synced: 14 Apr 2025

https://github.com/scicatproject/frontend

SciCat Project Official Frontend

data-catalog data-management doi metadata-catalog

Last synced: 18 Jan 2026

https://github.com/stuntspt/structure_threader

A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".

clustering doi genetics parallelize pypi python science structure structure-threader wrapper

Last synced: 21 Mar 2025

https://github.com/bibcure/title2bib

Given a title returns the bibtex

bibtex bibtexparser crossref doi

Last synced: 25 Jun 2025

https://github.com/aMarcireau/origami

An application to visualize scholar articles as an interactive graph

doi scholarly-articles science science-research

Last synced: 06 Apr 2025

https://github.com/mattsse/crossref-rs

A rust client for the Crossref-API

api crossref-api doi

Last synced: 04 Jul 2025

https://github.com/spirosbax/to-sci-hub

Search for a DOI (Digital Object Identifier) in Sci-Hub immediately after selecting it

academia chome-extension chrome chrome-extensions digital-object-identifier doi extension open-science paper sci-hub

Last synced: 06 Apr 2025

https://github.com/datacite/bracco

Frontend for the DataCite DOI Fabrica service

doi ember npm

Last synced: 17 Feb 2026

https://github.com/basnijholt/yaml2bib

📖 Convert a yaml file to bib file with the correct journal abbreviations.

bib bibtex convert crossref doi latex python yaml yaml-to-bib yaml-to-bibtex yaml2bib

Last synced: 22 Jun 2025

https://github.com/abd3lraouf/semantic

android + Kotlin + Semantic releases + SpotBugs + Jacoco + maven + Gradle + groovy + GitHub actions + SonarQube + commitlint

android android-library commitlint doi github-actions gradle jacoco maven-publish publish semantic-releases sonarqube spotbugs spotbugs-plugin workflows

Last synced: 12 Jan 2026

https://github.com/hboisgibault/unicontent

Python module to extract structured metadata from URL, ISBN or DOI

doi extraction google-books isbn metadata open-graph python url

Last synced: 06 Apr 2026

https://github.com/datacite/lupo

DataCite REST API

doi graphql jsonapi lupo rails-api ruby

Last synced: 29 Jan 2026

https://github.com/agents365-ai/paper-fetch

Legal open-access PDF downloader by DOI — Unpaywall, arXiv, PMC, bioRxiv. Multi-platform Agent Skill.

agent-skills claude-code claude-code-skill claude-skills doi open-access openclaw openclaw-skills pdf-downloader skill-md skillsmp unpaywall

Last synced: 15 Apr 2026

https://github.com/tdegeus/goosebib

Some simple command-line tools to clean-up / modify BibTeX files

arxiv bibtex bibtexparser doi formatter pre-commit python

Last synced: 20 Aug 2025

https://github.com/sckott/parseids

Parse identifiers (e.g., DOIs)

doi identifier pid r r-package rstats scholarly-metadata

Last synced: 12 Jul 2025

https://github.com/vsoch/citelang

markdown syntax and credit system for software!

citation credit doi publication research-software-engineering rseng

Last synced: 06 Mar 2026

https://github.com/alan-turing-institute/academic_review_tool

The Academic Review Tool (ART) is a package for performing academic reviews and bibliometric analyses in Python. It offers capabilities for discovering, retrieving, and analysing academic literature at scale.

academic academic-research bibliometric-analysis bibliometrics citation citation-network crossref doi literature-review orcid python scientometrics scopus

Last synced: 05 May 2025

https://github.com/hscells/doi

Parse and check doi objects in go.

doi go golang parser

Last synced: 12 Apr 2025

https://github.com/neotomadb/metaextractor

A repository for the UBC MDS Capstone team to develop a metadata extractor for Neotoma

crossref doi machine-learning metadata-extraction neotoma nlp relevance xdd

Last synced: 21 Jul 2025

https://github.com/alejandrogallo/python-doi

Python library to work with Document Object Identifiers (doi)

doi mendeley papis publications python-3 scholar scihub zotero

Last synced: 13 Apr 2025

https://github.com/sckott/extcite

pull dois out of pdfs > content negotation > bib file

bib citations doi extract pdf

Last synced: 15 Jul 2025

https://github.com/edamontology/pubfetcher

A Java command-line tool and library to download and store publications with metadata by combining content from various online resources

doi europe-pmc journals publications pubmed scraping

Last synced: 18 Feb 2026

https://github.com/wolfgangfahl/pysotsog

python Library for Scholars to achieve "Standing on the shoulders of giants"

doi nicegui orcid scholars wikidata

Last synced: 16 Mar 2025

https://github.com/revidiumhq/biblib

Parse, manage, and deduplicate academic citations

academic bibliography citations doi pubmed ris

Last synced: 20 Feb 2026

https://github.com/greenelab/library-access

Collecting data on whether library access to scholarly literature

articles catalog database dataset doi journals library literature sci-hub tool

Last synced: 11 Mar 2026

https://github.com/foucault/citation

Generate bibtex entries from Document Object Identifiers (DOI)

biblatex bibtex citations crossref doi issn latex python python3 tex

Last synced: 18 Jan 2026

https://github.com/lazappi/doilinker

Link Preprints And Publications By DOI

doi preprint publication r

Last synced: 03 Aug 2025

https://github.com/gederajeg/figshare-doi-badge

testing badge inclusion in readme

badge-generator doi figshare shieldsio

Last synced: 03 Feb 2026

https://github.com/daniel-km/omeka-s-module-bibliography

Module for Omeka S that adds a view helper to display Displays a standard citation for items and bibliographic resources.

citation citation-style-language doi isbn omeka-s omeka-s-module

Last synced: 28 Apr 2025

https://github.com/dpriskorn/wikidataorcidscraper

This tool helps scrape DOIs from https://orcid.org/ and curate them using Scholia

curation doi orcid scholia scientific-articles wikidata

Last synced: 05 Sep 2025

https://github.com/sckott/ftdoi

Retrieve full-text urls on a per publisher basis

doi r r-package rstats

Last synced: 06 Mar 2025

https://github.com/miku/hurrly

Hurry, hurrly!

code4lib doi

Last synced: 14 May 2026

https://github.com/albertocuadra/doi_scraper

Digital Object Identifier scraper written in Python

bibtex crossref crossref-api doi latex python research scraper

Last synced: 30 Jun 2025

https://github.com/frbcesab/agrite

:basket: Retrieve DOI from a full citation

bibtex crossref doi r web-of-science

Last synced: 24 Mar 2025

https://github.com/au-research/datacite-api-notebook

A Jupyter Notebook that interacts with the DataCite API. Deliberately uses minimal libraries to maximise compatibility with third-party Jupyter Hubs.

api datacite doi jupyter-notebook

Last synced: 19 Jan 2026

https://github.com/otvam/ieeetran_file_url_doi_link_bibtex

IEEEtran.bst BibTeX Style with File, DOI, and URL Links

bibtex doi ieeetran latex

Last synced: 25 May 2026

https://github.com/maxheld83/biblids

Validating with bibliometric identifiers

bibliometrics doi rstats rstats-package

Last synced: 28 Jan 2026

https://github.com/nasa-pds/doi-service

Service and tools for generating DOIs for PDS bundles, collections, and data sets

doi nasa nasa-pds pds

Last synced: 10 Mar 2026

https://github.com/ecodev/doi_system

OAI stands for Open Archives Initiative, a protocol for Metadata Harvesting - TYPO3 CMS extension

doi protocol typo3 typo3-extension

Last synced: 09 Oct 2025

https://github.com/nothingrandom/publication-ids

Javascript / Typescript validator and parser for publication ids; DOI, PMID, PMCID, ISBN, and ISSN

bun doi isbn isbn-13 node-module nodejs npm-package publishing typescript

Last synced: 18 Mar 2026

https://github.com/anoopkcn/clip

:paperclip: A command line reference manager, written in GO

arxive crossref dblp dissemin doi golang papers research

Last synced: 09 Jun 2026

https://github.com/neotomadb/ndblandingpage

A repository for DOI landing pages using Vue.js as the front-end.

doi neotoma vuejs

Last synced: 21 Jul 2025

https://github.com/commifreak/doi_url_updater

This tool updates DOIs URLs at DataCite.

api datacite doi url

Last synced: 18 Jun 2026

https://github.com/rkrahl/datacite

Create and manage DOIs using the DataCite API

datacite datacite-api doi

Last synced: 21 May 2026

https://github.com/teddy-van-jerry/doi-rs

Digital Object Identifier (DOI) resolver for Rust

doi resolver rust

Last synced: 13 Feb 2026

https://github.com/cosmocode/dokuwiki-plugin-doi

Easily link to publications based on DOI (or ISBN)

doi dokuwiki-plugin isbn

Last synced: 20 Jul 2025

https://github.com/caltechlibrary/manage_dois

Scripts for managing custom DOIs

datacite doi

Last synced: 13 Apr 2025

https://github.com/scieloorg/doi_request

Processing and User interface to retrieve and manage DOI registering process.

backoffice crossref doi

Last synced: 05 Jan 2026

https://github.com/ericoc/doi-ui

Experimenting with searching/displaying Digital Object Identifiers (DOIs).

doi publications research science science-research

Last synced: 11 Jun 2025

https://github.com/cyanheads/crossref-mcp-server

Resolve DOIs, search ~155M scholarly works, and fetch references via the Crossref REST API. STDIO or Streamable HTTP.

academic-search ai-agent bibliometrics bun citation crossref cyanheads doi llm mcp mcp-server model-context-protocol research scholarly-metadata stdio streamable-http typescript

Last synced: 29 May 2026

https://github.com/openbookpublishers/doi-prop-type

DOI React Prop Type

doi prop-type react

Last synced: 06 May 2026