Projects in Awesome Lists tagged with dsl2
A curated list of projects in awesome lists tagged with dsl2 .
https://github.com/georgiesamaha/configbuilder-nf
Nextflow config builder scripts for supported HPC infrastructures.
bioinformatics bioinformatics-pipeline config configuration dsl2 groovy hpc hpc-cluster nextflow nf-core pipeline
Last synced: 04 Oct 2025
https://github.com/sydney-informatics-hub/germline-structuralv-nf
Germline structural variant calling pipeline for short read WGS datasets
annotsv australian-biocommons bam bioinformatics dsl2 genomics germline-variant-calling manta nextflow ngs pipeline smoove structural-variants survivor tiddit workflow
Last synced: 02 Jan 2026
https://github.com/eipm/hello-mess-nf
A Nextflow pipeline to experiment with DSL2 + Zero Mess
Last synced: 02 Mar 2026
https://github.com/sydney-informatics-hub/template-nf
A straightforward Nextflow workflow template generator.
bioinformatics dsl2 genomics nextflow nextflow-pipeline pipeline template workflow
Last synced: 09 Feb 2026
https://github.com/cfsan-biostatistics/nowayout
nowayout is an ultra-fast automated software pipeline for taxonomic classification of Eukaryotic mitochondrial reads.
bioinformatics dsl2 metagenomics mitochondrial nextflow nextflow-workflow
Last synced: 06 Feb 2026
https://github.com/phac-nml/nf-sequenoscope
Streamlined Nextflow wrapper for the Sequenoscope toolkit. Simplifies complex metagenomic workflows with automated batch processing, allowing efficient comparative analysis from raw reads to visualization.
adaptive-sampling batch-processing data-visualization dsl2 metagenomics nextflow sequenoscope
Last synced: 16 Jan 2026
https://github.com/cnr-ibba/nf-neestimator
A nextflow pipeline for Current Effective Population Size (Ne) calculations with bootstrapping
bootstrap current dsl2 effective neestimator nextflow-pipeline pgdspider2 pipeline plink population size
Last synced: 03 Apr 2026
https://github.com/cnr-ibba/nf-modules
Custom Nextflow DSL2 modules
dsl2 modules nextflow nextflow-modules
Last synced: 03 Apr 2026