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Projects in Awesome Lists tagged with exome-sequencing
A curated list of projects in awesome lists tagged with exome-sequencing .
https://github.com/sdhutchins/vcf-prepping
Scripts used on a cluster that demonstrate vcf file manipulation and preparation.
bcftools exome-sequencing vcf wgs whole-genome-sequencing
Last synced: 22 Dec 2024
https://github.com/pasted/variant_parser
Selects possible pathogenic variants from an Alamut output
exome-sequencing hpo variant-parser variants
Last synced: 07 Nov 2024
https://github.com/pasted/trio_generator
Example workflow to generate a trio VCF from parental data
bioinformatics exome-sequencing genetics
Last synced: 07 Nov 2024
https://github.com/giatraskon/chromosome11-variantcalling-gatk
A streamlined pipeline for germline variant calling on chromosome 11 using GATK. This repository includes workflows for data preprocessing, variant discovery, and annotation, with a focus on understanding genetic variations linked to disease-associated genes.
1000genomes bam bcftools bioinformatics bwa exome-sequencing gatk gatk4-haplotypecaller genome-analysis haplotypecaller human-genome indels population-genetics reference-genome samtools snpeff snps variant-annotation variant-calling vcf
Last synced: 13 Dec 2024
https://github.com/starsareintherose/rgbepp
Reference Genome based Exon Phylogeny Pipeline
exome exome-sequencing exome-sequencing-analysis next-generation-sequencing phylogeny
Last synced: 17 Dec 2024