Projects in Awesome Lists tagged with high-dimensional-data

https://github.com/nvidia/minkowskiengine

Minkowski Engine is an auto-diff neural network library for high-dimensional sparse tensors

3d-convolutional-network 3d-vision 4d-convolutional-neural-network auto-differentiation computer-vision convolutional-neural-networks cuda deep-learning high-dimensional-data high-dimensional-inference minkowski-engine neural-network pytorch semantic-segmentation space-time sparse-convolution sparse-tensor-network sparse-tensors spatio-temporal-analysis trilateral-filter

Last synced: 14 May 2025

https://nvidia.github.io/MinkowskiEngine/

Minkowski Engine is an auto-diff neural network library for high-dimensional sparse tensors

3d-convolutional-network 3d-vision 4d-convolutional-neural-network auto-differentiation computer-vision convolutional-neural-networks cuda deep-learning high-dimensional-data high-dimensional-inference minkowski-engine neural-network pytorch semantic-segmentation space-time sparse-convolution sparse-tensor-network sparse-tensors spatio-temporal-analysis trilateral-filter

Last synced: 08 May 2025

https://github.com/NVIDIA/MinkowskiEngine

Minkowski Engine is an auto-diff neural network library for high-dimensional sparse tensors

3d-convolutional-network 3d-vision 4d-convolutional-neural-network auto-differentiation computer-vision convolutional-neural-networks cuda deep-learning high-dimensional-data high-dimensional-inference minkowski-engine neural-network pytorch semantic-segmentation space-time sparse-convolution sparse-tensor-network sparse-tensors spatio-temporal-analysis trilateral-filter

Last synced: 20 Mar 2025

https://github.com/contextlab/hypertools

A Python toolbox for gaining geometric insights into high-dimensional data

data-visualization data-wrangling high-dimensional-data python text-vectorization time-series topic-modeling visualization

Last synced: 29 Jan 2026

https://github.com/ContextLab/hypertools

A Python toolbox for gaining geometric insights into high-dimensional data

data-visualization data-wrangling high-dimensional-data python text-vectorization time-series topic-modeling visualization

Last synced: 07 Apr 2025

https://github.com/vdaas/vald

Vald. A Highly Scalable Distributed Vector Search Engine

anng approximate-nearest-neighbor-search cloud cloud-native distributed-systems golang high-dimensional-data high-performance image-search image-search-engine kubernetes microservices nearest-neighbor-search ngt similarity-search vald vector vector-search-engine

Last synced: 13 May 2025

https://github.com/abess-team/abess

Fast Best-Subset Selection Library

best-subset-selection classification-algorithm cox-regression feature-selection high-dimensional-data linear-regression logistic-regression machine-learning multitask-learning ordinal-regression poisson-regression polynomial-algorithm principal-component-analysis python r robust-principal-component-analysis scikit-learn sparse-principal-component-analysis sure-independence-screening

Last synced: 15 May 2025

https://github.com/ramhiser/datamicroarray

A collection of small-sample, high-dimensional microarray data sets to assess machine-learning algorithms and models.

cancer colon-cancer high-dimensional-data machine-learning r

Last synced: 22 Jun 2025

https://github.com/gdkrmr/dimred

A Framework for Dimensionality Reduction in R

dimensionality-reduction framework high-dimensional-data manifold-learning quality-control r visualization

Last synced: 06 Apr 2025

https://github.com/gdkrmr/dimRed

A Framework for Dimensionality Reduction in R

dimensionality-reduction framework high-dimensional-data manifold-learning quality-control r visualization

Last synced: 13 Jul 2025

https://github.com/sergiocorreia/ppmlhdfe

Poisson pseudo-likelihood regression with multiple levels of fixed effects

fixed-effects high-dimensional-data poisson-regression separation stata

Last synced: 24 Jan 2026

https://github.com/daleroberts/hdmedians

High-dimensional medians (medoid, geometric median, etc.). Fast implementations in Python.

high-dimensional-data machine-learning median python statistics

Last synced: 10 Apr 2025

https://github.com/great-northern-diver/loon

A Toolkit for Interactive Statistical Data Visualization

data-analysis data-science data-visualization exploratory-analysis exploratory-data-analysis high-dimensional-data interactive-graphics interactive-visualizations loon python statistical-analysis statistical-graphics statistics tcl-extension tk

Last synced: 19 Feb 2026

https://github.com/varir/scikit-hubness

A Python package for hubness analysis and high-dimensional data mining

approximate-nearest-neighbor-search data-mining data-science high-dimensional-data hubness machine-learning nearest-neighbor-search

Last synced: 17 Aug 2025

https://github.com/nanxstats/hdnom

🔮 Benchmarking and visualization toolkit for penalized Cox models

benchmark high-dimensional-data linear-regression nomogram-visualization penalized-cox-models survival-analysis

Last synced: 06 May 2025

https://github.com/lightonai/newma

Implementation of NEWMA: a new method for scalable model-free online change-point detection

change-point-detection hardware-acceleration high-dimensional-data machine-learning paper python timeseries

Last synced: 26 Aug 2025

https://github.com/epigen/unsupervised_analysis

A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.

cluster-analysis cluster-validation clustering clustering-algorithm clustree data-science data-visualization densmap dimensionality-reduction heatmap high-dimensional-data leiden-algorithm pca principal-component-analysis snakemake umap unsupervised-learning visualization workflow

Last synced: 15 Apr 2025

An interactive 3D web viewer of up to million points on one screen that represent data. Provides interaction for viewing high-dimensional data that has been previously embedded in 3D or 2D. Based on graphosaurus.js and three.js. For a Linux release of a complete embedding+visualization pipeline please visit https://github.com/sonjageorgievska/Embed-Dive.

3d-data embedded-data high-dimensional-data interactive-visualizations manifold-learning non-linear-dimensionality-reduction web-application

Last synced: 17 Jun 2025

https://github.com/joshengels/flinng

A fast high dimensional near neighbor search algorithm based on group testing and locality sensitive hashing

group-testing high-dimensional-data locality-sensitive-hashing nearest-neighbor-search

Last synced: 04 Nov 2025

https://github.com/ofai/hub-toolbox-python3

Hubness analysis and removal functions

data-mining high-dimensional-data hubness machine-learning

Last synced: 11 Oct 2025

https://github.com/KChen-lab/SCMarker

Marker gene selection from scRNA-seq data

feature-selection high-dimensional-data single-cell-rna-seq statistical-methods

Last synced: 09 Apr 2025

https://github.com/ivan-pi/fortran-flann

Fortran bindings to the FLANN library for performing fast approximate nearest neighbor searches in high dimensional spaces.

approximate-nearest-neighbor-search hierarchical-clustering high-dimensional-data kdtree kmeans-clustering nearest-neighbor-search spatial-search

Last synced: 07 Jan 2026

https://github.com/ramhiser/sparsediscrim

Sparse and Regularized Discriminant Analysis in R

classifier high-dimensional-data machine-learning r

Last synced: 23 Jun 2025

https://github.com/nanxstats/msaenet

🧲 Multi-step adaptive estimation for reducing false positive selection in sparse regressions

false-positive-control high-dimensional-data linear-regression machine-learning variable-selection

Last synced: 22 Apr 2025

https://github.com/acidjazz/json-browse

jQuery plugin to easily browse and highlight your JSON

high-dimensional-data jquery-plugin json json-api json-browse

Last synced: 05 Mar 2026

https://github.com/shu-hai/D-CCA

A Decomposition-based Canonical Correlation Analysis for High-dimensional Datasets (JASA-20 paper)

data-fusion data-integration high-dimensional-data integrative-analysis multiblock-structures multiview

Last synced: 13 Apr 2025

https://github.com/longhaisk/htlr

Bayesian Logistic Regression with Hyper-LASSO priors

bayesian classification high-dimensional-data machine-learning mcmc

Last synced: 01 Mar 2026

https://github.com/astro-informatics/quantifai

PyTorch-based radio-interferometric imaging reconstruction package with scalable Bayesian uncertainty quantification relying on data-driven (learned) priors

high-dimensional-data machine-learning pytorch radio-interferometry uncertainty-quantification

Last synced: 10 Oct 2025

https://github.com/lirongwu/dcv

Code for TNNLS paper "Deep Clustering and Visualization for End-to-End High Dimensional Data analysis"

clustering geometric-deep-learning high-dimensional-data manifold-learning visualization

Last synced: 13 Apr 2025

https://github.com/llnl/fpp

Function preserving projection (FPP), a linear projection technique for capturing interpretable patterns of high-dimensional functions

data-viz dimensionality-reduction discriminant-analysis high-dimensional-data projection supervised-dimensionality-reduction visualization

Last synced: 29 Apr 2025

https://github.com/abess-team/a-splicing-approach-to-best-subset-of-groups-selection

best-subset-selection group-selection high-dimensional-data

Last synced: 11 Apr 2025

https://github.com/statphysandml/pystatplottools

Easy evaluation and plotting of statistical data and high-dimensional distributions in python - Fast generation, loading and storing of custom datasets.

contour-plots custom-datasets distributions expectation-values high-dimensional-data

Last synced: 15 Jul 2025

https://github.com/nanxstats/ohpl

📈 Ordered Homogeneity Pursuit Lasso for Group Variable Selection

chemometrics high-dimensional-data homogeneity-pursuit lasso partial-least-squares-regression spectroscopy variable-selection

Last synced: 22 Apr 2025

https://github.com/inseefrlab/grandedim

Codes correspondant au document de travail "L'économétrie en grande dimension"

data-science econometrics high-dimensional-data publication r statistics

Last synced: 13 Jun 2025

https://github.com/mlindsk/molic

Multivariate Outlierdetection In Contingency Tables

categorical-data contingency-tables decomposable-graphical-models high-dimensional-data outlier-detection

Last synced: 22 Oct 2025

https://github.com/otryakhin-dmitry/global-minimum-variance-portfolio

High dimensional shrinkage optimal portfolios in R

financial-mathematics high-dimensional-data portfolio-management shrinkage-estimators

Last synced: 22 Oct 2025

https://github.com/nanxstats/bcpm-msaenet

Solution for the precisionFDA Brain Cancer Predictive Modeling Challenge using msaenet

brain-cancer high-dimensional-data machine-learning precisionfda variable-selection

Last synced: 22 Apr 2025

https://github.com/numbats/cassowaryr

Compute scagnostics on your scatterplots

data-science data-visualization eda high-dimensional-data multivariate

Last synced: 19 Feb 2026

https://github.com/bellet/hdsl

High-Dimensional Similarity Learning

high-dimensional-data machine-learning metric-learning similarity-learning sparse-data

Last synced: 03 Apr 2025

https://github.com/insightsengineering/unicate

Univariate conditional average treatment effect estimation for predictive biomarker discovery

biomarkers clinical-trials high-dimensional-data nonparametrics r treatment-effects

Last synced: 17 Jul 2025

https://github.com/varir/copac

COPAC clustering

cluster-analysis clustering clustering-algorithm data-mining high-dimensional-data machine-learning

Last synced: 15 Jul 2025

https://github.com/insightsengineering/unihtee

Tools for uncovering treatment effect modifiers in high-dimensional data.

heterogeneous-treatment-effects high-dimensional-data nonparametrics targeted-learning variable-importance

Last synced: 05 Jul 2025

https://github.com/erik-roberts/GIMBL-Vis

a GUI-based Interactive Multi-dimensional extensiBLe Visualization toolbox for Matlab

graphics high-dimensional-data interactive matlab matlab-toolbox multi-dimensional simulations visualization

Last synced: 05 Apr 2026

https://github.com/llnl/nddav

N-Dimensional Data Analysis and Visualization

data-analysis data-viz high-dimensional-data topological-data-analysis visual-analytics visualization

Last synced: 29 Apr 2025

https://github.com/krystynagrzesiak/gslope

Sparse Gaussian graphical models with Sorted L-One Penalized Estimation

graphical-models high-dimensional-data regularization-methods sparse-modeling

Last synced: 12 May 2026

https://github.com/cfmtech/optimal_cleaning_for_singular_values_of_cross-covariance_matrices

Python scripts from paper Optimal cleaning for singular values of cross-covariance matrices, by Florent Benaych-Georges, Jean-Philippe Bouchaud, Marc Potters (see https://arxiv.org/abs/1901.05543)

cross-correlation cross-correlation-processing denoising high-dimensional-data high-dimensional-probability high-dimensional-statistics probability probability-statistics probability-theory random-matrices random-matrix random-matrix-theory rotationally-invariant-estimator statistics