Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with hmmer
A curated list of projects in awesome lists tagged with hmmer .
https://github.com/althonos/pyhmmer
Cython bindings and Python interface to HMMER3.
bioinformatics cython-library hidden-markov-model hmmer hmmer3 python-bindings python-library sequence-analysis
Last synced: 26 Nov 2024
https://github.com/robaina/pynteny
Query sequence database by HMMs arranged in predefined synteny structure
bioinformatics computational-biology genomics hmm hmmer metagenomics prokaryotic-genomes python synteny synteny-block
Last synced: 27 Oct 2024
https://github.com/ctskennerton/kegg_hmm_models
Create HMMs from KEGG orthologs
bioinformatics hidden-markov-model hmm hmmer kegg kegg-ortholog kegg-pathway-database
Last synced: 15 Dec 2024
https://github.com/biogenies/plastogram
Predicts subplastid localization of proteins along with sequence origin (plastid- or nuclear-encoded).
bioinformatics chloroplast hmm-profile hmmer plastid r-package random-forest subchloroplast-localization subplastid-localization
Last synced: 19 Nov 2024
