Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists tagged with image-stacks
A curated list of projects in awesome lists tagged with image-stacks .
https://github.com/biologytools/bioimager
A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.
histology image-acquisition image-stacks imagej imagej-macro imaging micro-manager microscope microscope-control microscope-stage-controller microscopy plugin scripting whole-slide-imaging
Last synced: 03 Dec 2024
https://github.com/biologytools/biogtk
A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
bio-formats biology cross-platform geojson gtk image-stacks imagej imagej-roi imagej-tiff microscopy omero openslide plugins qupath roi segment-anything segment-anything-model whole-slide-image
Last synced: 19 Nov 2024
https://github.com/peter-t-ruehr/checkpoint_converter
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
biology botany checkpoint geometric-morphometrics image-stacks imagej imagej-macro micro-ct mri r tomography zoology
Last synced: 13 Nov 2024
https://github.com/peter-t-ruehr/stack_cropping
ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.
biology conversion cropping-images fiji histology image-macro image-stacks imagej material-science micro-ct mri tomography
Last synced: 13 Nov 2024