Projects in Awesome Lists tagged with jaspar
A curated list of projects in awesome lists tagged with jaspar .
https://github.com/moosa-r/rbioapi
rbioapi: User-Friendly R Interface to Biologic Web Services' API
api-client bioinformatics biology cran enrichment enrichment-analysis enrichr jaspar mieaa over-representation-analysis panther r reactome rstats rstats-package string uniprot
Last synced: 12 May 2025
https://github.com/jumitti/tfinder
Python script to quickly extract promoter and terminator regions with the NCBI API. Search for the presence of individual pattern or transcription factor responsive elements with manual sequence (IUPAC) or JASPAR API.
api dna dna-sequences iupac jaspar ncbi promoter-sequences python python3 responsive-elements streamlit terminator-sequences transcription-factor transcription-factor-binding-site transcription-factors webtools
Last synced: 11 Apr 2025
https://github.com/mbelmadani/motifgp
Motif discovery for DNA sequences using multiobjective optimization and genetic programming.
bioinformatics chip-seq deap dna dna-sequences genetic-programming jaspar motif motif-discovery multiobjective-optimization network-expressions nsga-ii pareto-front python regular-expressions sequences strongly-typed transcription-factor-binding transcription-factors
Last synced: 07 May 2025
